Gene
RNA
| Item | Value |
|---|---|
| gene id | G72236 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 64644484 ~ 64647187 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: 60S ribosomal protein L8 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU79843 | True | 202 | lncRNA | 0.50 | 2 | 64644484 | 64647187 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526867 | LOC100136521 | coding | downstream | 259963 | 64369803 ~ 64384521 (-) |
| LOC110526858 | LOC106604947 | coding | downstream | 529760 | 64049113 ~ 64114724 (-) |
| LOC110526836 | LOC106576780 | coding | downstream | 663769 | 63694607 ~ 63980715 (-) |
| LOC110526802 | LOC106576784 | coding | downstream | 965271 | 63654551 ~ 63679213 (-) |
| LOC110532553 | LOC106576784 | coding | downstream | 989848 | 63630570 ~ 63654636 (-) |
| LOC110526927 | LOC106576773 | coding | upstream | 145173 | 64792360 ~ 64801660 (-) |
| LOC110526944 | lrrc27 | coding | upstream | 155205 | 64802392 ~ 64809629 (-) |
| LOC110526980 | LOC106576770 | coding | upstream | 304655 | 64951842 ~ 64957672 (-) |
| LOC118964437 | NA | coding | upstream | 416093 | 65063280 ~ 65064797 (-) |
| mcfd2 | mcfd2 | coding | upstream | 521655 | 65168842 ~ 65171950 (-) |
| G72176 | NA | non-coding | downstream | 105347 | 64538535 ~ 64539137 (-) |
| LOC110526894 | LOC106605012 | non-coding | downstream | 151775 | 64472402 ~ 64735581 (-) |
| G71450 | NA | non-coding | downstream | 201976 | 64441972 ~ 64442508 (-) |
| G71208 | NA | non-coding | downstream | 395676 | 64248537 ~ 64248808 (-) |
| G71204 | LOC106585892 | non-coding | downstream | 398111 | 64246145 ~ 64246373 (-) |
| G72292 | NA | non-coding | upstream | 76161 | 64723348 ~ 64723769 (-) |
| G72310 | NA | non-coding | upstream | 96292 | 64743479 ~ 64744536 (-) |
| G72324 | LOC106576775 | non-coding | upstream | 134214 | 64781401 ~ 64783733 (-) |
| G72429 | NA | non-coding | upstream | 292228 | 64939415 ~ 64939632 (-) |
| G72431 | NA | non-coding | upstream | 294397 | 64941584 ~ 64941880 (-) |
| G70013 | NA | other | downstream | 1366732 | 63277208 ~ 63277752 (-) |
| G69210 | NA | other | downstream | 2226188 | 62411522 ~ 62418296 (-) |
| LOC110526417 | LOC106576819 | other | downstream | 2662089 | 61981652 ~ 61983330 (-) |
| G68736 | NA | other | downstream | 2958176 | 61682278 ~ 61686308 (-) |
| tjap1 | tjap1 | other | upstream | 2171657 | 66806836 ~ 66883731 (-) |
| LOC110527436 | ppp2r5d | other | upstream | 2347495 | 66965664 ~ 67010646 (-) |
| LOC110527584 | LOC106576720 | other | upstream | 2739322 | 67386509 ~ 67389299 (-) |
| LOC110527687 | sncg | other | upstream | 3022402 | 67669589 ~ 67681775 (-) |
| sdhaf4 | LOC106576700 | other | upstream | 3510774 | 68157900 ~ 68162024 (-) |
