G71779


Basic Information

Item Value
gene id G71779
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 64905999 ~ 64932480 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU79372
ctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgTAAGTATTCTGCCAGCACACGGGACGTTTCTCAGGTGTGCCTTTCAAGACACAGCCTGCGAATACCTCGCTGTCCCCTTCGGGCTAGCACTAGCATACACAAACGTTCAGCAAGTGTGTGGAAGCAGCCCCAACACAGGAGAAAGCGGTATGCGACATGACTTCCCTTTTAACCCATCTCAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79372 True 241 lncRNA 0.50 2 64905999 64932480

Neighbor

gene id symbol gene type direction distance location
LOC110526912 LOC106576775 coding upstream 122262 64773915 ~ 64783737 (+)
LOC110526877 LOC106576777 coding upstream 434915 64468523 ~ 64471084 (+)
LOC118965254 NA coding upstream 907698 63980371 ~ 63998531 (+)
LOC110526795 NA coding upstream 1284570 63620237 ~ 63621429 (+)
LOC110526778 LOC106576786 coding upstream 1307193 63565503 ~ 63598806 (+)
LOC110526991 LOC106576769 coding downstream 39914 64972394 ~ 64984304 (+)
LOC110532561 LOC106576767 coding downstream 60590 64993070 ~ 65016685 (+)
LOC110527002 rhoq coding downstream 88723 65021203 ~ 65041610 (+)
LOC110527013 socs5 coding downstream 135608 65068088 ~ 65120931 (+)
prop1 LOC100192335 coding downstream 229178 65161658 ~ 65167877 (+)
G71472 NA non-coding upstream 445630 64460165 ~ 64460369 (+)
G71468 NA non-coding upstream 447089 64458532 ~ 64458910 (+)
G71464 NA non-coding upstream 449866 64455663 ~ 64456133 (+)
G71456 NA non-coding upstream 458305 64447482 ~ 64447694 (+)
G71449 NA non-coding upstream 463529 64441931 ~ 64442470 (+)
G71653 NA non-coding downstream 10854 64943334 ~ 64985289 (+)
G71654 NA non-coding downstream 54748 64987228 ~ 64991904 (+)
G71826 NA non-coding downstream 71805 65004285 ~ 65037581 (+)
G71935 NA non-coding downstream 262338 65194818 ~ 65256475 (+)
LOC110526969 stk32c other upstream 4375 64809255 ~ 64946164 (+)
G70011 NA other upstream 1630703 63274963 ~ 63275296 (+)
G67930 mcmbp other upstream 3172611 61729765 ~ 61733388 (+)
G67806 LOC106581772 other upstream 3590747 61314874 ~ 61315252 (+)
G66188 NA other upstream 4963935 59941486 ~ 59942064 (+)
LOC110527164 LOC106576754 other downstream 983255 65915581 ~ 65922285 (+)
G73515 NA other downstream 1355199 66287679 ~ 66288469 (+)
LOC118965274 LOC106576739 other downstream 1488015 66417495 ~ 66424081 (+)
G74067 LOC106576735 other downstream 1823727 66756207 ~ 66758984 (+)
G74139 NA other downstream 1851855 66784335 ~ 66784969 (+)

Expression


Co-expression Network