Gene
RNA
| Item | Value |
|---|---|
| gene id | G71653 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 64943334 ~ 64985289 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU79234 | True | 665 | lncRNA | 0.37 | 2 | 64943334 | 64985289 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526912 | LOC106576775 | coding | upstream | 159597 | 64773915 ~ 64783737 (+) |
| LOC110526877 | LOC106576777 | coding | upstream | 472250 | 64468523 ~ 64471084 (+) |
| LOC118965254 | NA | coding | upstream | 945033 | 63980371 ~ 63998531 (+) |
| LOC110526795 | NA | coding | upstream | 1321905 | 63620237 ~ 63621429 (+) |
| LOC110526778 | LOC106576786 | coding | upstream | 1344528 | 63565503 ~ 63598806 (+) |
| LOC110532561 | LOC106576767 | coding | downstream | 7781 | 64993070 ~ 65016685 (+) |
| LOC110527002 | rhoq | coding | downstream | 35914 | 65021203 ~ 65041610 (+) |
| LOC110527013 | socs5 | coding | downstream | 82799 | 65068088 ~ 65120931 (+) |
| prop1 | LOC100192335 | coding | downstream | 176369 | 65161658 ~ 65167877 (+) |
| LOC110527046 | LOC106576764 | coding | downstream | 188000 | 65173289 ~ 65221687 (+) |
| G71779 | NA | non-coding | upstream | 10854 | 64905999 ~ 64932480 (+) |
| G71472 | NA | non-coding | upstream | 482965 | 64460165 ~ 64460369 (+) |
| G71468 | NA | non-coding | upstream | 484424 | 64458532 ~ 64458910 (+) |
| G71464 | NA | non-coding | upstream | 487201 | 64455663 ~ 64456133 (+) |
| G71456 | NA | non-coding | upstream | 495640 | 64447482 ~ 64447694 (+) |
| G71654 | NA | non-coding | downstream | 1939 | 64987228 ~ 64991904 (+) |
| G71826 | NA | non-coding | downstream | 18996 | 65004285 ~ 65037581 (+) |
| G71935 | NA | non-coding | downstream | 209529 | 65194818 ~ 65256475 (+) |
| G71945 | NA | non-coding | downstream | 244875 | 65230164 ~ 65231403 (+) |
| LOC110526969 | stk32c | other | upstream | 41710 | 64809255 ~ 64946164 (+) |
| G70011 | NA | other | upstream | 1668038 | 63274963 ~ 63275296 (+) |
| G67930 | mcmbp | other | upstream | 3209946 | 61729765 ~ 61733388 (+) |
| G67806 | LOC106581772 | other | upstream | 3628082 | 61314874 ~ 61315252 (+) |
| G66188 | NA | other | upstream | 5001270 | 59941486 ~ 59942064 (+) |
| LOC110527164 | LOC106576754 | other | downstream | 930446 | 65915581 ~ 65922285 (+) |
| G73515 | NA | other | downstream | 1302390 | 66287679 ~ 66288469 (+) |
| LOC118965274 | LOC106576739 | other | downstream | 1435206 | 66417495 ~ 66424081 (+) |
| G74067 | LOC106576735 | other | downstream | 1770918 | 66756207 ~ 66758984 (+) |
| G74139 | NA | other | downstream | 1799046 | 66784335 ~ 66784969 (+) |
