G71654


Basic Information

Item Value
gene id G71654
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 64987228 ~ 64991904 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU79236
cctcgccttctggatgatagcagggtgaagaggcagtggctcgggtggttgttgtccttgatgatctttttggccttcctgtgacatcgggtggtctaggtgtcctggagggcaggtagttttcccccggtgatgcgttgtgcagacctcactaccctctggagagccttacgattgtgggcgggtcagttgtcgtaccaggcagtgatacaggaTGCTctagattgtgcatctgtaaaagtttgagagtgtttttggtgacaagccgaatttcttcagcctcctgtacAACACATTACCTTCCTTACAAGTAAAAAGAAAAGCAGCATAGGAAAGCATAATGACTGTTGGGACCTTTTTATTGACAAGTCTTTAGTGAggtagccagctaggtaacattaGCTCCCGGTTTGTGTAGTCATACTTTTTCACGTGGTGGCATGCTAGATAGTGTTGGCCCACCAGGGAAGggatattttgtaaatattagctagttaacgttaactCACCTTTTGTGCACAGACTTGCTAGCCAACGTTAGGCCGGCACCATGGCAAGGATAGTTGTTAGATAGCATGTTACCACACACAAATTCTGACTACACGAACGGtgagctaatgttaactagctaaataCTGCCTGGTGGGCTAACTAGTTAAGCACCTTggttggctagttagctacattaGCTCAAGTTGGCTAGCCATCTCACAAAGGACTTGTGGGCTCAATGTTTTCCCCACACAACACACAGTGCATATGTTGTACATTACTTGACTTCAAATTACTTGTGAAGTCAGTTATACATGTCAGCAGGGATGGAAATTAAGCTAGCCCGAGACTAGTACTTTTCAGACTGGGCTAGTAGACAATGTGACAAACTAGCCTGACAGCAGTAAAAATAACCAGCATAGGCTATCATTATGACTGCTGTGACCTTTTAGTTTTGACAAGCCCTTTGTGAACAAGCCatctagttaacgttagctcaCGGTTTGTGTAGTCATACTTTCTCACGTGGTGACATGCTAACTTACGTTAGCCCAGCAGGGCAGAGATTTAGCTAGTTAAATATTGCCTGGTAGGCTAGCTAGTTAGGCACATTGGTTGGCTACATTAGCTAACGTTGCATAGTATCTCACCGTGGTGTAGTCTGACTTTCCCGAAAGGCCTAATGTGAGAATGTGCCTGTTGTTAAGGGTTGCGTCAATCGAATATGGTATCAGATTAAATATGACAtcgagtcaccgattgtatactatgtactttttattagctaagcaataagtggtaaatgcaatttttgtATATACGGGTTCGCTGTAACACCATGCAGGGTAGAACAGAGGACTGATTTGTTCCTGACAAATGTATTATAATATATTCTGAcagaagtagttcctgcttcTGAGCCGGTCTgtcacagagtagagactgggcgtggtttaaactcactccgcctatcgttgattgttggcgccagagctggtcccagccccctaggtgcttcagcggtcagtcgttgtagtTGTGTAGAATATCTATGCGCCTATGCTCGATACAGTTATCacacacctggctcctgttatctaacaaaatactgtttgttctcgcaacactacgttctgaatgtgcccccacaactcattgcacagttcctgtcttcatgttattctgtatttttccatcatgagaaaggcccatggccctgaaactgttaacaatgtctcaagtcagctatgttgcataacacatacacccacacaagccaacagcaaatAATATTCCATCacatatatggtaacgggctatagtgtaTAACACAGAACCTCACACTGTTGTTAGCGATTAGcactaactagctaacgttaaatATCCCCTAGCTAGCATGTCACATCCCGTGGTGTCTGGGTAAAAGTCTGACTACACAAACGATGAGGTAACGTACCTAGCTAGCTAAGCGTTAGCTAAATATCCACGCCCTGGtgggctaacattagctagcatgTCACCACATGGAAAAGTGACTACACAAACAGTGAGGTAAcattaactagctggctagctagctcagGACTTGTGGGCTCAATGTTTTCCCGTAGAAAAAACAAATGGTTTTGTTCCACAAGTGCATCTGTACATGACTAATCAGATGACCTGTGAAGTcagttatacagtgcattcggaaagtattcagactttttccattttgttacattacaaccttattctaaaattgattaaattgtttttttcccctcatcaatctacacataataccccataatggcaaagcaaaaacagATGGGCGGACTGGAAAACCAGTGACAACTTTCGGCTCTGCAGCTACCATTTTCCGGTGGGAAAGAGAAATTGACCTGTATTTACAAGAAAAGCTATCTATCTCATCCACCATGGCAGAAGAAGAAGATCCAGACTGTTGattggaaaacaaaaacaaattatgAGCCATGAGGATTGGGTGTTGAGCGACCACTTGTCACATTGTCCAAGGTGGATGGAAATGGACATCCTGTGCCAGTGTGATCTGAATGCAAGCGTCCTGGTGTCccttttattttattcatttaatctttatttaactattcaagtcagttaagaacaaattcttatttacaatgttggCCTAACAAAAGGCCTCATGTGGAGACTggggccaggtggaaagcatggccagccgtagaaaaatgcttattgaaattctcaattatagtggatttatcagtggtgacagtatcAATCATATAGTGAGAAGGATACTACAAATCAGAATTGTGTGAATGCATGTAGCACTCCGAATAAATACTGTGCCTTTGAAGATCGACCTCTGGTCATGAAACTACAGTACAGGCTGGATGTCTAAACAAAGTCAATTCTTAAGATCAATAGATTTTTAGATTAATTCTCATCAATGACAACATTCTAGAACTGAGTTATCACTCATCTAAGTCTGGTATCCAGAGTAATCTGGTTAATGATTATATAATTGATTAAGTGGCTCTTTCCttgtagaatgttgacagcagtATAGAACATATTGTATTGCTAAGATGCTCAAACTTAACTTAATAGCTACACTCACCGACACAGGATAAACTTTATCCCTTATACTGACCCTGACCAAACCAGTAAATTGCCCCTCACTATAGCTGCACTTCTTATCATGGCCAGACTTATAGTGGTCTTCGCCCCCCTTTTAATGCTTATGCACATCCTTGAAAAATGACAAAAGTCGACATACTGTACAAACAATTATCTAGGCTGATGATTTGTTGATCTACTGctctacctagctagctagctaaggtgTAGTCAGTGGCTAGCTAAGACCGAGATGGGACGGAAGAAGTTTAACACTATTCAATACAGCATATGGATTCATCATGGATTAGGCACAGGTCTCTGATCACGCTGGTGAACAGTAGCTGAAAGTGTCGGATAGAGATGATGTGCAGGAGCTTCCTGCAGGAATTTGTAGTCTTGCTAAGGTCTTCTCtgttgctaattagcatttcaacATTTTTTGAGTACATATTGATAAAACTCACCTTGTCAGAGAGAATTGCACGGTTTGTCAAAAACGTCAAGCCTAGGTAAGCCAACACCAAACAAATACTTAGTTTGAAGTGTTTATAAAATTCAcgatgtgaaaaatgaatggtgaaaaAACGACTGGAACCATTTctgtgtttgaccgctaggttttatgggtataaTGATGCGTCCACTGTGCCAGAGGGAAAGTGTTCAGACACATGCCACAGTTCTAGCTGGGCTACTAAAATGTTGCAGTGTGGGTTTCGTTTTTAAAGCTTGACAATGAATAACCATAAAACAAAACACCACGCAAAGGAGGAACATGTAGGTCTATTACAGCAACATTTGAGCAGTagcctaggctggctactcaactagGACTACAAGATATTTTATGTGCACCATACAGCGAAGCTGCATTCAACCACACAGGTTACCCATgtaatgcaaaaaaaacaaacatgttttaaGTGTAGGATAAATGTTACAACAGCCTAGCTACATTTTTGTTATTTGGAGTTATTAAATACTTGTTGATTTGGGTCACAGCTTATTATGCACATCTGCAAGCACAGCGGCAAAGGCTGGACAAATatcatttctctctccttttgtTTTAATATGTAAAAAATGCTATATACAGCATCCTATGTTTTTAAGTGGACATTATACAGTGCCATATTTTTTTCTAATAAAACAATGGCCAGTTTGGGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU79236 True 4272 lncRNA 0.40 2 64987228 64991904

Neighbor

gene id symbol gene type direction distance location
LOC110526991 LOC106576769 coding upstream 2924 64972394 ~ 64984304 (+)
LOC110526969 stk32c coding upstream 41064 64809255 ~ 64946164 (+)
LOC110526912 LOC106576775 coding upstream 203491 64773915 ~ 64783737 (+)
LOC110526877 LOC106576777 coding upstream 516144 64468523 ~ 64471084 (+)
LOC118965254 NA coding upstream 988927 63980371 ~ 63998531 (+)
LOC110532561 LOC106576767 coding downstream 1166 64993070 ~ 65016685 (+)
LOC110527002 rhoq coding downstream 29299 65021203 ~ 65041610 (+)
LOC110527013 socs5 coding downstream 76184 65068088 ~ 65120931 (+)
prop1 LOC100192335 coding downstream 169754 65161658 ~ 65167877 (+)
LOC110527046 LOC106576764 coding downstream 181385 65173289 ~ 65221687 (+)
G71653 NA non-coding upstream 1939 64943334 ~ 64985289 (+)
G71779 NA non-coding upstream 54748 64905999 ~ 64932480 (+)
G71472 NA non-coding upstream 526859 64460165 ~ 64460369 (+)
G71468 NA non-coding upstream 528318 64458532 ~ 64458910 (+)
G71464 NA non-coding upstream 531095 64455663 ~ 64456133 (+)
G71826 NA non-coding downstream 12381 65004285 ~ 65037581 (+)
G71935 NA non-coding downstream 202914 65194818 ~ 65256475 (+)
G71945 NA non-coding downstream 238260 65230164 ~ 65231403 (+)
G71997 plekhh2 non-coding downstream 335689 65327593 ~ 65328512 (+)
G70011 NA other upstream 1711932 63274963 ~ 63275296 (+)
G67930 mcmbp other upstream 3253840 61729765 ~ 61733388 (+)
G67806 LOC106581772 other upstream 3671976 61314874 ~ 61315252 (+)
G66188 NA other upstream 5045164 59941486 ~ 59942064 (+)
LOC110527164 LOC106576754 other downstream 923831 65915581 ~ 65922285 (+)
G73515 NA other downstream 1295775 66287679 ~ 66288469 (+)
LOC118965274 LOC106576739 other downstream 1428591 66417495 ~ 66424081 (+)
G74067 LOC106576735 other downstream 1764303 66756207 ~ 66758984 (+)
G74139 NA other downstream 1792431 66784335 ~ 66784969 (+)

Expression

G71654 Expression in all Baseline Samples

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G71654 Expression in each Bioproject

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G71654 Expression in each Sample
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Co-expression Network