G71935


Basic Information

Item Value
gene id G71935
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 65194818 ~ 65256475 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU79529
gagctgagataaggcggggctttatctagcaaagacttatagatgacctggaaccagtgggtttggtgacgaatatgaagtgaATATGAagcgcagtggtgggtagtataggGGGCTTTGGTGtcgaaacggatggcactgtgatagactgcatccaaatccaaatcatgtccaatcaattgaatttaccacaagtagactccaatcaagttgtagaaacatctcaaggatgatcaatggaaacagactgcacctgagctcaatttcgagtctcatagtaaagggtctgaatacttatgtaaataaggtatttttgtttttcattttttaaataaatttgctaaaatgtctaaaaacctgttttcgctttgtcattatgggttattgtgtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU79529 True 391 lncRNA 0.39 2 65194818 65256475

Neighbor

gene id symbol gene type direction distance location
prop1 LOC100192335 coding upstream 26941 65161658 ~ 65167877 (+)
LOC110527013 socs5 coding upstream 73887 65068088 ~ 65120931 (+)
LOC110527002 rhoq coding upstream 153208 65021203 ~ 65041610 (+)
LOC110532561 LOC106576767 coding upstream 178133 64993070 ~ 65016685 (+)
LOC110526991 LOC106576769 coding upstream 210514 64972394 ~ 64984304 (+)
LOC110527082 epcam coding downstream 35233 65291708 ~ 65296104 (+)
thada LOC106576760 coding downstream 115824 65372299 ~ 65476515 (+)
LOC110527092 tisd coding downstream 222458 65478933 ~ 65482225 (+)
LOC110527114 LOC106576759 coding downstream 423549 65680024 ~ 65697328 (+)
LOC110527123 NA coding downstream 538512 65794987 ~ 65799491 (+)
G71826 NA non-coding upstream 157237 65004285 ~ 65037581 (+)
G71654 NA non-coding upstream 202914 64987228 ~ 64991904 (+)
G71653 NA non-coding upstream 209529 64943334 ~ 64985289 (+)
G71779 NA non-coding upstream 262338 64905999 ~ 64932480 (+)
G71997 plekhh2 non-coding downstream 71118 65327593 ~ 65328512 (+)
G72047 NA non-coding downstream 149955 65406430 ~ 65444673 (+)
G72812 NA non-coding downstream 306638 65563113 ~ 65563455 (+)
G72866 NA non-coding downstream 400850 65657325 ~ 65662302 (+)
G72858 LOC100136012 non-coding downstream 430274 65686749 ~ 65735864 (+)
LOC110526969 stk32c other upstream 293194 64809255 ~ 64946164 (+)
G70011 NA other upstream 1919522 63274963 ~ 63275296 (+)
G67930 mcmbp other upstream 3461430 61729765 ~ 61733388 (+)
G67806 LOC106581772 other upstream 3879566 61314874 ~ 61315252 (+)
G66188 NA other upstream 5252754 59941486 ~ 59942064 (+)
LOC110527164 LOC106576754 other downstream 659260 65915581 ~ 65922285 (+)
G73515 NA other downstream 1031204 66287679 ~ 66288469 (+)
LOC118965274 LOC106576739 other downstream 1164020 66417495 ~ 66424081 (+)
G74067 LOC106576735 other downstream 1499732 66756207 ~ 66758984 (+)
G74139 NA other downstream 1527860 66784335 ~ 66784969 (+)

Expression


Co-expression Network