G72595


Basic Information

Item Value
gene id G72595
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 65195256 ~ 65198584 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU80244
AAGTCATAGCGCCTCTGCAAGAGCTGCAGCATGTCTTGGCAGGTCTGGAGTGCTATACCTGGCCCATGCAGAGCCTCCTCCAGCTTCACCTTAGTGAACAGCAGGCTGAGTGACAAGGAGGACATTAACACAACAATACAGCATACATCAATTAGTACACCATTAGCACTTACCACATTGATACAATCAATAGTTGTTGACATGCGCGATGAACAGACAGGGCTTGGCCGAAGCCCTGGGTATCTTGTGatgatgacatgcattatctgtattaggcccacagaattatacctacggaggaccggcttctatggaggaacttcGAATGTCTTTGAACGTCAGAGATTTGGTCggaccagagctagctagctagctaacaagcttgtgtgtgcagagcgtcACCAGAATAAGAAATACGTCTTACTTTTTTGTAGtaaataaatccaatgtgaaacgtgataactatagtatctgcagtggtgtaaagtactacttaagtagttttttttttttttaatctgtactttattattcatatttttgacaacttttacgtCACTACATTTctgaagaaaatattgtactttaagttttccctgacaaccaaaagtacttgttacactttgaatgcttagcaggacaggacaattgtcaaattcaagcacttatcaagagaacatgtggtcatccctactgcccctgGCCTGGCGGAATCACTAAATacatgcatcttttgtaaataatgcctgagtgttggagtgtgcccctggctatccgtaaatttaaaaaaacaagtaaaTGGTGACATCTGCTTTgcctaatataaggaattttaaatgatttatacttttacttttgatactaaagtatattttagcaattacatttacttttaatactgaagtatatttaaaaccaaatacttttagacttttactcaagtagtattttactcgctgcctttcacttttacttgagtaactttctattacggcatctttacttttactcaagtatgataattaggtacttttcccaccactgagtATCTGTAACTAGCATTGAAAGAATGTATCAATGCATTGTTCTCTAATTAAAAATCTCTCCCTAATTCCTGAATCACGTTTGTGACGTCAGTAGGCTACAGCGATGcttcagagggggaggggcaggtagcctgcacacacactggcaaagattttcagctggctggcagacactggaatatgttgagtgacagagggagggctTGTTGCGTTTTTTTGTGGGACTGAAAAAAAAAATGCCCAGATTGTAAAATAACGTTATTAACCAGTTCGCTTGCTTTTAAAATAAcagttctgttccggaacagcATAGATCACTTTCATTCCCACATGTGATTATTTTTGACATTTTCCAGTTTTCGGTTCTAATTCCTGAACCGGTTCGAACCCCCGCACCAAACACATCAGCAAACATACACAACCACCCCACAATATAGACTCAATGTTGACACAACATTGCTGTGTTTGCTAGGTCAGCACATActgttgacacatcaaccaggacCTGACAATACTATCATATAGGATCATCATGTTTATCAATGTATGTTTATAGAGCTTTGGTCCTCTGTTCTCCAACAGATGGGTGAGGAGGAAGACCTGTTTCAATGGCCAATGTCCACCAATAGACAAATAGACTGGACAAATACAGACGCTCCCCCAGATTTTCCAATGGctccacacacacgtacagtggGGGCTAGTCATCTGCTCTGTGTGTGATAGATGGAGAGAGGTTGAGTATGTAAcgggaaaagaaagagagagacagagagagagttagggccTTCTTTCAAccgtgtgagagagcgagagacgccCGTCTGTGCCTGCTTGctgtctttctgcctgcctgtctccctctctgcctatctgcttgcctgtctgtctccattcctgtctatctccctgttcccctgcctgcctgactgctcCCCCAACTGAATCCTCTTCCAAttattcctccctctcctcatctctggcTGCCAGACAGCACTAGCGATCAATAGCGCAGCGAGCCTTCGTCGGGGGAAGAACTACCGGTGAAATGTGGCTCGTTACTTGGTCACGGGTGGGCGGGCGGGCTGGGGGGATGGAGcgagggatggggggatggagggaggagagatgccTACTGGATCATCTGACATGAGGATGACAACTGCTGCTGAGGGATGTGATGTTAAGGATACGCCTGTCAGTGGGGCCAGTTGGGGCTGAGGGTTTCCTATTAGCCCCCGTGCCGAGCAGCGTTTAGTAGTGGAGTGATGTGCCGTGTGTTAGTGGGCTTcctcctgggtgtgtgtgtgtgtgtaagcactcacgcacgcacacacgcacacacactaacatcCTGCAAGATGAATGCAGAATCAAAGGCTGGGATTAATCATTCTCTTTAGAACAAACTGTgaaactactctctctctctcctcccttccccctctccctttccctttctacAGCTCTCTCACTGTGCTAGATAGAATTCAATTTAGATTGGAAATGCTCGCCTGTTTACTGGCTGATTAAAATTTCAAACATAGACAGaaagatttaaaaaaagaatGCAACAGGCTATTACTGCATTTTAAGGTAAAAGCTCAATAAAATGTCTCAAATATAAGAAAAATGTCCacatgtccctctcctcgcccctaactgggctcgaaccagggaccctctgcacacaccaACAActgtcacccacgaagcatcgttacccatcgctccacaaaagccaacaactacttcaaggtctcagagcaagtgatgtctCCGATTGaaaccaccgctaactagctagccatttcacatcggttgcACACACATGTCAACTGTTTCACCCAATTGCTGTCTGCTATTAATAAATGAACTGTGGCACCATGTGGCTTGAATAGACATTTGTGTTTAGAGGCTACCTACGGACATGGCATACGAGACGTGAGAAATGAATCGAGATCTGCGTGTTTACACTACAGTAATAAGTGTCTACGCGCATATTATTATCAATGTCCATGTATTGTAGTGTAAAAGCTGTATGTTAGGagaaaaagaaagacagaaaCTGAGCGAGAAACAACAAGGATTCAGTGTCTGTGCTACAGTGGTGCAGAGATTCTATGACTAGCGCCACCTCGCATGCACACGCGTGCACAAACCCTCACACAACCTGCTCAAACCAAATCTTCAGCATCATTTCTACACACATACAGCGCTTtggtaaagtattcagactccttgacttaaaaaaaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU80244 True 3304 lncRNA 0.44 2 65195256 65198584
Loading

Neighbor

gene id symbol gene type direction distance location
mcfd2 mcfd2 coding downstream 23306 65168842 ~ 65171950 (-)
LOC118964437 NA coding downstream 130459 65063280 ~ 65064797 (-)
LOC110526980 LOC106576770 coding downstream 237584 64951842 ~ 64957672 (-)
LOC110526944 lrrc27 coding downstream 385627 64802392 ~ 64809629 (-)
LOC110526927 LOC106576773 coding downstream 393596 64792360 ~ 64801660 (-)
stpg4 cssa18h2orf61 coding upstream 31473 65230057 ~ 65235096 (-)
calm2a LOC107561747 coding upstream 41672 65240256 ~ 65245210 (-)
si:ch73-105b23.6 LOC106576763 coding upstream 64697 65263281 ~ 65287052 (-)
plekhh2 plekhh2 coding upstream 103101 65301685 ~ 65372123 (-)
LOC118966709 NA coding upstream 321950 65520534 ~ 65551007 (-)
G72530 NA non-coding downstream 100368 65092897 ~ 65094888 (-)
G72523 NA non-coding downstream 100761 65086215 ~ 65094495 (-)
G72455 NA non-coding downstream 198587 64996203 ~ 64996669 (-)
G72454 NA non-coding downstream 202201 64992572 ~ 64993055 (-)
G72402 NA non-coding downstream 203908 64985226 ~ 64991348 (-)
G72610 NA non-coding upstream 26515 65225099 ~ 65226040 (-)
G72636 NA non-coding upstream 93150 65291734 ~ 65292022 (-)
G72639 NA non-coding upstream 96638 65295222 ~ 65296093 (-)
G72648 NA non-coding upstream 121220 65319804 ~ 65320210 (-)
G72778 NA non-coding upstream 305122 65503706 ~ 65504399 (-)
LOC110526867 LOC100136521 other downstream 813900 64369803 ~ 64384521 (-)
G70013 NA other downstream 1917504 63277208 ~ 63277752 (-)
G69210 NA other downstream 2776960 62411522 ~ 62418296 (-)
LOC110526417 LOC106576819 other downstream 3212861 61981652 ~ 61983330 (-)
G68736 NA other downstream 3508948 61682278 ~ 61686308 (-)
tjap1 tjap1 other upstream 1620260 66806836 ~ 66883731 (-)
LOC110527436 ppp2r5d other upstream 1796098 66965664 ~ 67010646 (-)
LOC110527584 LOC106576720 other upstream 2187925 67386509 ~ 67389299 (-)
LOC110527687 sncg other upstream 2471005 67669589 ~ 67681775 (-)
sdhaf4 LOC106576700 other upstream 2959377 68157900 ~ 68162024 (-)

Expression

G72595 Expression in all Baseline Samples

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G72595 Expression in each Bioproject

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G72595 Expression in each Sample
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Co-expression Network