Gene
RNA
| Item | Value |
|---|---|
| gene id | G72636 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 65291734 ~ 65292022 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: epithelial cell adhesion molecule isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU80299 | True | 253 | lncRNA | 0.32 | 2 | 65291734 | 65292022 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch73-105b23.6 | LOC106576763 | coding | downstream | 4682 | 65263281 ~ 65287052 (-) |
| calm2a | LOC107561747 | coding | downstream | 46524 | 65240256 ~ 65245210 (-) |
| stpg4 | cssa18h2orf61 | coding | downstream | 56638 | 65230057 ~ 65235096 (-) |
| mcfd2 | mcfd2 | coding | downstream | 119784 | 65168842 ~ 65171950 (-) |
| LOC118964437 | NA | coding | downstream | 226937 | 65063280 ~ 65064797 (-) |
| plekhh2 | plekhh2 | coding | upstream | 9663 | 65301685 ~ 65372123 (-) |
| LOC118966709 | NA | coding | upstream | 228512 | 65520534 ~ 65551007 (-) |
| trnai-uau | NA | coding | upstream | 511237 | 65803259 ~ 65803352 (-) |
| LOC110527131 | LOC106576756 | coding | upstream | 519484 | 65808644 ~ 65822642 (-) |
| LOC110527186 | LOC106576747 | coding | upstream | 728999 | 66021021 ~ 66141226 (-) |
| G72610 | NA | non-coding | downstream | 65694 | 65225099 ~ 65226040 (-) |
| G72595 | NA | non-coding | downstream | 93150 | 65195256 ~ 65198584 (-) |
| G72530 | NA | non-coding | downstream | 196846 | 65092897 ~ 65094888 (-) |
| G72523 | NA | non-coding | downstream | 197239 | 65086215 ~ 65094495 (-) |
| G72455 | NA | non-coding | downstream | 295065 | 64996203 ~ 64996669 (-) |
| G72639 | NA | non-coding | upstream | 3200 | 65295222 ~ 65296093 (-) |
| G72648 | NA | non-coding | upstream | 27782 | 65319804 ~ 65320210 (-) |
| G72778 | NA | non-coding | upstream | 211684 | 65503706 ~ 65504399 (-) |
| G72780 | NA | non-coding | upstream | 216684 | 65508706 ~ 65509101 (-) |
| G72810 | NA | non-coding | upstream | 269981 | 65562003 ~ 65562266 (-) |
| LOC110526867 | LOC100136521 | other | downstream | 910378 | 64369803 ~ 64384521 (-) |
| G70013 | NA | other | downstream | 2013982 | 63277208 ~ 63277752 (-) |
| G69210 | NA | other | downstream | 2873438 | 62411522 ~ 62418296 (-) |
| LOC110526417 | LOC106576819 | other | downstream | 3309339 | 61981652 ~ 61983330 (-) |
| G68736 | NA | other | downstream | 3605426 | 61682278 ~ 61686308 (-) |
| tjap1 | tjap1 | other | upstream | 1526822 | 66806836 ~ 66883731 (-) |
| LOC110527436 | ppp2r5d | other | upstream | 1702660 | 66965664 ~ 67010646 (-) |
| LOC110527584 | LOC106576720 | other | upstream | 2094487 | 67386509 ~ 67389299 (-) |
| LOC110527687 | sncg | other | upstream | 2377567 | 67669589 ~ 67681775 (-) |
| sdhaf4 | LOC106576700 | other | upstream | 2865939 | 68157900 ~ 68162024 (-) |
