G72960


Basic Information

Item Value
gene id G72960
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 65831379 ~ 65831608 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU80653
aattttgtttctggtgtcctttgacagctctttggtcttggccatagtggagtttggagtgtgactgtttgaggttgtggacaggtgtcttttatactgattacaagttcaaacaggtgccattaatacaagtaacgagtggaggacagaggagcctcttaaagaagaagttacaggtctgtgagagccagaaatcttgcttgtttgtaagtgaccaaatacttattttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU80653 True 230 lncRNA 0.41 1 65831379 65831608

Neighbor

gene id symbol gene type direction distance location
hcar1-3 LOC106576755 coding upstream 2636 65826347 ~ 65828743 (+)
LOC110527123 NA coding upstream 31977 65794987 ~ 65799491 (+)
LOC110527114 LOC106576759 coding upstream 134051 65680024 ~ 65697328 (+)
LOC110527092 tisd coding upstream 349154 65478933 ~ 65482225 (+)
thada LOC106576760 coding upstream 354864 65372299 ~ 65476515 (+)
LOC110527154 LOC106576753 coding downstream 66819 65898427 ~ 65911535 (+)
LOC110527164 LOC106576754 coding downstream 83973 65915581 ~ 65922285 (+)
LOC110532572 LOC106576752 coding downstream 162260 65993868 ~ 65999848 (+)
LOC110527177 LOC106576750 coding downstream 168649 66000257 ~ 66003340 (+)
wu:fj16a03 LOC100135970 coding downstream 182577 66014081 ~ 66019044 (+)
G72954 NA non-coding upstream 25094 65805959 ~ 65806285 (+)
G72858 LOC100136012 non-coding upstream 95515 65686749 ~ 65735864 (+)
G72866 NA non-coding upstream 169077 65657325 ~ 65662302 (+)
G72812 NA non-coding upstream 267924 65563113 ~ 65563455 (+)
G73321 NA non-coding downstream 150061 65981669 ~ 65981892 (+)
G73334 NA non-coding downstream 174425 66006033 ~ 66006238 (+)
G73311 LOC106576750 non-coding downstream 181269 66012877 ~ 66013340 (+)
G73488 NA non-coding downstream 421513 66253121 ~ 66253342 (+)
LOC110526969 stk32c other upstream 929755 64809255 ~ 64946164 (+)
G70011 NA other upstream 2556083 63274963 ~ 63275296 (+)
G67930 mcmbp other upstream 4097991 61729765 ~ 61733388 (+)
G67806 LOC106581772 other upstream 4516127 61314874 ~ 61315252 (+)
G66188 NA other upstream 5889315 59941486 ~ 59942064 (+)
G73515 NA other downstream 456071 66287679 ~ 66288469 (+)
LOC118965274 LOC106576739 other downstream 588887 66417495 ~ 66424081 (+)
G74067 LOC106576735 other downstream 924599 66756207 ~ 66758984 (+)
G74139 NA other downstream 952727 66784335 ~ 66784969 (+)

Expression


Co-expression Network