Gene
RNA
| Item | Value |
|---|---|
| gene id | G75246 |
| gene name | pygb |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 67402541 ~ 67413256 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| pygb | Predicted to enable glycogen phosphorylase activity and pyridoxal phosphate binding activity. Predicted to be involved in glycogen catabolic process. Predicted to act upstream of or within glycogen metabolic process. Predicted to be active in cytoplasm. Is expressed in several structures, including eye; gill; heart; integument; and pleuroperitoneal region. Orthologous to human PYGB (glycogen phosphorylase B). |
| description |
|---|
| glycogen phosphorylase, brain form |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU83182 | True | 2754 | lncRNA | 0.49 | 13 | 67402541 | 67413256 |
67,394,000
67,396,000
67,398,000
67,400,000
67,402,000
67,404,000
67,406,000
67,408,000
67,410,000
67,412,000
67,414,000
67,416,000
67,418,000
NC_048565.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527584 | LOC106576720 | coding | downstream | 13242 | 67386509 ~ 67389299 (-) |
| LOC110527518 | vsx1 | coding | downstream | 111323 | 67288562 ~ 67291218 (-) |
| acss1 | acss1 | coding | downstream | 131302 | 67252292 ~ 67271239 (-) |
| LOC110527505 | apmap | coding | downstream | 167107 | 67226729 ~ 67235434 (-) |
| LOC110527477 | LOC106576725 | coding | downstream | 266752 | 67068696 ~ 67135789 (-) |
| abhd12 | LOC106576716 | coding | upstream | 2483 | 67415739 ~ 67443770 (-) |
| ninl | ninl | coding | upstream | 33185 | 67446441 ~ 67499228 (-) |
| LOC118966711 | LOC106606039 | coding | upstream | 101504 | 67514760 ~ 67515221 (-) |
| LOC118965291 | NA | coding | upstream | 102030 | 67515286 ~ 67516815 (-) |
| LOC110527634 | nfkb2 | coding | upstream | 161798 | 67575052 ~ 67593740 (-) |
| G75254 | NA | non-coding | downstream | 17166 | 67385119 ~ 67385375 (-) |
| G75237 | NA | non-coding | downstream | 27822 | 67374499 ~ 67374719 (-) |
| G75236 | NA | non-coding | downstream | 28447 | 67373883 ~ 67374094 (-) |
| G75234 | NA | non-coding | downstream | 34140 | 67368186 ~ 67368401 (-) |
| G75233 | NA | non-coding | downstream | 34437 | 67366873 ~ 67368104 (-) |
| G75314 | NA | non-coding | upstream | 105558 | 67518814 ~ 67519037 (-) |
| G75315 | NA | non-coding | upstream | 106657 | 67519913 ~ 67520212 (-) |
| G75319 | NA | non-coding | upstream | 111460 | 67524716 ~ 67524946 (-) |
| G75322 | NA | non-coding | upstream | 115283 | 67528539 ~ 67529102 (-) |
| LOC110527436 | ppp2r5d | other | downstream | 391954 | 66965664 ~ 67010646 (-) |
| tjap1 | tjap1 | other | downstream | 579725 | 66806836 ~ 66883731 (-) |
| LOC110526867 | LOC100136521 | other | downstream | 3021185 | 64369803 ~ 64384521 (-) |
| G70013 | NA | other | downstream | 4124789 | 63277208 ~ 63277752 (-) |
| LOC110527687 | sncg | other | upstream | 256333 | 67669589 ~ 67681775 (-) |
| sdhaf4 | LOC106576700 | other | upstream | 744705 | 68157900 ~ 68162024 (-) |
| G75682 | NA | other | upstream | 796924 | 68210180 ~ 68211706 (-) |
| LOC110527951 | coda1 | other | upstream | 1162337 | 68575379 ~ 68690343 (-) |
| LOC118965321 | LOC106576963 | other | upstream | 2669584 | 70082835 ~ 70088715 (-) |
