G75246 (pygb)


Basic Information

Item Value
gene id G75246
gene name pygb
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 67402541 ~ 67413256 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU83182
AACGTGATTGCGGTGACAAGTGATACAGTACTTATTGAAGGATGAAAAAAGACAACTGCTTAAAAAAAAGGTAGTTACTGAGAAACAGCATATTTTTCTTTGAAGTACATTTAGCGAAGACATTTAAGTGATGCTACTGAAATATAGATTATACTCATACAGTAGCCATCTCATTTCAGAAGTCACGCCAAGGCCATTTGTGGTGACAGCTGCTCCATAATCTCTGAAGTGGGAGTGTTCTAACAGGCCACTGAGCATGGTTTTCCTCATAAGGGACATAGTGAAGCATCAGAACTGTTTCGCCAAGCTGTATACTacacattttcaaatcaaatacaGTAGAATTGTACAAAACGTTCCATTAGACCAATGGCATGTTACAACTTTAAACCAGGCACTTGCTTCTAGATAATTGTTTCTCTCTCTTATGAATGCTATGGTCCAAAATTGGTACATTAATGACCAGGCACTTACTTAACATATAGACAAATATCACAGTACACATTCTATAACTCTGAAATGCAATGCTTTGTCAGTGATGATTAAAACAAAATCCCCATTACAAGTCTTAGTAGCAaacaaaatgtgttatttttgGTTGACTATTCCGAGGCAGTAGTAGACCAATCATATTCAGCAGTGTAAACTGTATGGTCATTACTGATCAACTGGGATTGGCATCTACAGTATACGTGCACATGGTGGAGTCAAAGACAAGCAGGAGTAATAGTAAGCAGAGGCTAGAGTCAAACACGCTTCCTTTGGCTGTTTAAGACGTTGTACATGCGATCTGCCTCCGACTCGAACCCCATCTCTGCAATGTGGTAATGGGTGGGCTATGAGTCAAGCCTGATGAGACAGACCTACAGCGAGGAGAAGTAACACAAGCACTTCTCTCCTAACTGGAGAGTGAAGGCGGGCTCCTCATTTGCGGGATTCAACAGGGGGCTCGTTGGGGGGTGGGATCTTCACATCGGAGGGCTCCACGCCCCAGATATCCCGGGCGTACTCGCTGATGGTTCGGTCGCTGGAGAACTTGCCGGAACCCGCAATGTTTCGAATCACTGTTCTTGTCCACTCTTTAGGGTTCTTGTATAGCTCATTGACTCGATCTTGGCAAGTGATGTAGGCCTCATAGTCAGCAAACACTTTGAACCTGTCGTGGTTCATCAGCATGTTCACCACATCCTTGAAGAGCTCATGCTCTTTGGGACTGAAGTAGCCAGTCTGGATCTGATCTATCACCTGCCTCAGCTCTGATAGACGCTCGTAGTACTCCCTGGCATTGTACCCTGTTTTGTCCATGGCATCCACATCCTCTACCCTCATGCCGAAGATGAAGAGGTTCTCCTCTCCGGCCTCCTCAGCCATCTCTACGTTGGCGCCGTCCATGGTGCCGATGGTGAGCGCTCCGTTCAGCATGAACTTCATGTTGCCAGTGCCAGAGGCCTCTGTTCCCGCTGTGGAGATCTGTTCTGATAAGTCAGCTGCAGGGATCACTTTCTCTGCTAGGGAGACCCTGTAGTTCTCAAGGTAGATGACCTTTAACCTGTCCCCCACCACCGGGTCGTTGTTGATCACCTGGCCCACCGCCGTGATCAGCTTGATGATCATTTTGGCCATGTGGTAGCCAGGTGCAGCCTTTCCTCCAATTATCACAGTCCTGGGAACAAAGTGTTTAGAGGGGTCCTTTTTAATCCGGTTGTAGAAGGTGATGATGTGGAGGACGTTGAGCAGTTGTCTCTTGTACTCATGGATTCTCTTCACATGGATGTCAAAGATGGACTCAGGGTTGATCTTCACCTCATACTCCTTCTCCAGGTAGGCTGCAAACTTCTGCTTGTTCTCCTGTTTTACATTGGCGATGTCACAAATGAAAGCATCTTCATCAATGAAGTCCAGTAGTTTCCTCAGCTGGAAGAGGTCTGTCAAGAAGTCGTCTCCAATTTTCTCAGCGATGAGGTCAGCCAGGCCTGGGTTACACAGCAGCAGCCAGCGGCGAGGAGTGATACCATTGGTCTTGTTCTGGAACTTCTCTGGCTCCACCTCATAGAAGTCCTTGAAAACAGTGTTCTTGACGATTTCAGAGTGGATCCGGGCGACCCCGTTGACAGCGTGGGAGCCCACCACACACAAGTGGGCCATGTTGATCCTCTTGGGGTCTCCCTCCTCGATCAGGGACATCCTCCTCAGACGGTCATGGTCCCCTGGGAACATGGCAGCGATCCTttggaggtggaggtggttgATCTCGTAGATGATCTGCAGGTGGCGAGGCAGCAGCTTCTCAAACAGGTTGATGGGCCAGCGCTCCAGGGCCTCAGGCAGGACGGTGTGGTTGGTGTAGGCACAGGTCTGACGCGTCACCTCCCaagccttgtcccagtccaaCTTCTCCAGATCCACTAGGATCCTCATCAGCTCAGGGATGGCCAAGGCAGGGTGGGTGTCATTCAGCTGGATGGCCACCTTCTCTGGGAAGGTCTCAAAGGAGGTCCTGACAGGGTCTCTGCAGCCAAACTTGGAAGACTTGAAGCGGCGGATGATGTCCTGCAGTGTGGCGGCCACCACAAAGTACTCTTGCTTCAGACGCAGCTCCTTGCCCTCAAAGAACTGAGCACACACACTTTAGAATGATAACAGTCTATTCTCAAAGCAATCACTCAAGGGCAAGTTGACCCCATGTGGTGAATACCTAGCATCAGTTTAGCGTCGGACACAGATTTGCAGacgttatcgcaggtgcagtgaaat

Function

symbol description
pygb Predicted to enable glycogen phosphorylase activity and pyridoxal phosphate binding activity. Predicted to be involved in glycogen catabolic process. Predicted to act upstream of or within glycogen metabolic process. Predicted to be active in cytoplasm. Is expressed in several structures, including eye; gill; heart; integument; and pleuroperitoneal region. Orthologous to human PYGB (glycogen phosphorylase B).

NR:

description
glycogen phosphorylase, brain form

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83182 True 2754 lncRNA 0.49 13 67402541 67413256

Neighbor

gene id symbol gene type direction distance location
LOC110527584 LOC106576720 coding downstream 13242 67386509 ~ 67389299 (-)
LOC110527518 vsx1 coding downstream 111323 67288562 ~ 67291218 (-)
acss1 acss1 coding downstream 131302 67252292 ~ 67271239 (-)
LOC110527505 apmap coding downstream 167107 67226729 ~ 67235434 (-)
LOC110527477 LOC106576725 coding downstream 266752 67068696 ~ 67135789 (-)
abhd12 LOC106576716 coding upstream 2483 67415739 ~ 67443770 (-)
ninl ninl coding upstream 33185 67446441 ~ 67499228 (-)
LOC118966711 LOC106606039 coding upstream 101504 67514760 ~ 67515221 (-)
LOC118965291 NA coding upstream 102030 67515286 ~ 67516815 (-)
LOC110527634 nfkb2 coding upstream 161798 67575052 ~ 67593740 (-)
G75254 NA non-coding downstream 17166 67385119 ~ 67385375 (-)
G75237 NA non-coding downstream 27822 67374499 ~ 67374719 (-)
G75236 NA non-coding downstream 28447 67373883 ~ 67374094 (-)
G75234 NA non-coding downstream 34140 67368186 ~ 67368401 (-)
G75233 NA non-coding downstream 34437 67366873 ~ 67368104 (-)
G75314 NA non-coding upstream 105558 67518814 ~ 67519037 (-)
G75315 NA non-coding upstream 106657 67519913 ~ 67520212 (-)
G75319 NA non-coding upstream 111460 67524716 ~ 67524946 (-)
G75322 NA non-coding upstream 115283 67528539 ~ 67529102 (-)
LOC110527436 ppp2r5d other downstream 391954 66965664 ~ 67010646 (-)
tjap1 tjap1 other downstream 579725 66806836 ~ 66883731 (-)
LOC110526867 LOC100136521 other downstream 3021185 64369803 ~ 64384521 (-)
G70013 NA other downstream 4124789 63277208 ~ 63277752 (-)
LOC110527687 sncg other upstream 256333 67669589 ~ 67681775 (-)
sdhaf4 LOC106576700 other upstream 744705 68157900 ~ 68162024 (-)
G75682 NA other upstream 796924 68210180 ~ 68211706 (-)
LOC110527951 coda1 other upstream 1162337 68575379 ~ 68690343 (-)
LOC118965321 LOC106576963 other upstream 2669584 70082835 ~ 70088715 (-)

Expression


Co-expression Network