G74879



Basic Information


Item Value
gene id G74879
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 67595523 ~ 67595887 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU82773
gtaatgtactgtgtagctcagttgtaattcagttggtagagcacggcgcTTGCAATGTcatggttgtgggttcgattcccatggggggaccagtatgaaaatgtatgcactcactactgtaagtcgctctggataaaagcatctgctaaattactaaaatgtcaaatgtactgttatctgctgtgctctactgtcaaaatttgtgaaacatagatgtctatgattggttcaaatTTGTTCCTTTCCAGACCAACCGATCATAGACGTCCATGTTTGGACTAAATCAAGGCTGGTCTGGACAAAATCTGAATGTCTATGTTTTGGCCAAATATAAAAAGACGTCGCCTGACGACAAATGCTTGGGG

Function


NR:

description
Deoxyribonuclease gamma precursor

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU82773 True 365 lncRNA 0.41 1 67595523 67595887

Neighbor


gene id symbol gene type direction distance location
psda LOC106576711 coding upstream 20474 67528611 ~ 67575049 (+)
aifm2 amid coding upstream 88842 67499187 ~ 67506681 (+)
gins1 gins1 coding upstream 149030 67443706 ~ 67446493 (+)
pygb pygb coding upstream 182238 67388041 ~ 67413285 (+)
LOC110532586 NA coding upstream 208516 67356070 ~ 67387886 (+)
glud1 gdh01 coding downstream 790 67596677 ~ 67638420 (+)
mmrn2a mmrn2 coding downstream 109904 67705791 ~ 67724360 (+)
LOC118965297 NA coding downstream 520241 68116128 ~ 68117384 (+)
LOC110527784 LOC106576702 coding downstream 531978 68127865 ~ 68140839 (+)
slc2a15a LOC106576697 coding downstream 679492 68275379 ~ 68295406 (+)
G74875 NA non-coding upstream 4963 67590236 ~ 67590560 (+)
G74799 NA non-coding upstream 8925 67586368 ~ 67586598 (+)
G74814 NA non-coding upstream 18574 67576658 ~ 67576949 (+)
G74851 NA non-coding upstream 80994 67513851 ~ 67514529 (+)
G74852 NA non-coding upstream 82717 67512429 ~ 67512806 (+)
G74880 NA non-coding downstream 482 67596369 ~ 67596592 (+)
G74790 NA non-coding downstream 73784 67669671 ~ 67671554 (+)
G74945 NA non-coding downstream 104082 67699969 ~ 67702937 (+)
G74956 NA non-coding downstream 197894 67793781 ~ 67795363 (+)
G75004 NA non-coding downstream 204288 67800175 ~ 67800581 (+)
G74139 NA other upstream 810554 66784335 ~ 66784969 (+)
G74067 LOC106576735 other upstream 836539 66756207 ~ 66758984 (+)
LOC118965274 LOC106576739 other upstream 1171442 66417495 ~ 66424081 (+)
G73515 NA other upstream 1307054 66287679 ~ 66288469 (+)
LOC110527164 LOC106576754 other upstream 1673238 65915581 ~ 65922285 (+)
G75747 NA other downstream 778618 68374505 ~ 68374929 (+)
G78121 NA other downstream 2975778 70571665 ~ 70654961 (+)
ccdc85a ccdc85a other downstream 3440583 71036440 ~ 71076239 (+)
G82111 LOC106577091 other downstream 5955729 73551616 ~ 73571737 (+)
G83836 NA other downstream 7313338 74909225 ~ 74909806 (+)

Expression


G74879 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 2.
End of interactive chart.

G74879 Expression in each Bioproject

Bar chart with 15 bars.
G74879 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 25.
End of interactive chart.

Co-expression Network


Homologous


species gene id symbol gene type chromosome NCBI id location