XLOC_002027


Basic Information

Item Value
gene id XLOC_002027
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 17438158 ~ 17438484 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005852
TTGAGATTCGTCGAGGGAAAATGGCCGCTCATTTCATCTGTTGAAACAGTCGCTACAAAAAAAACTAGTCAAGTGGTAACGTTACTGCTGCTGTTAAACCTTTACTAACAACATGAGCCGTGAGGAATCAACACACGGTAGAGGAGTTTTTTGAAGATGTCTCTTTCTGCATGTTAAGATGAGAAGAATATCCATAAAACATCACAAATAAACTTGCAAGTGAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005852 True 224 lncRNA 0.38 2 17438158 17438484

Neighbor

gene id symbol gene type direction distance location
XLOC_002023 NA coding upstream 4280 17235277 ~ 17433878 (+)
XLOC_002026 NA coding upstream 16135 17420675 ~ 17422023 (+)
XLOC_002025 NA coding upstream 172797 17263598 ~ 17265361 (+)
XLOC_002024 NA coding upstream 175903 17261485 ~ 17262255 (+)
XLOC_002022 BX324123.2 coding upstream 310710 17127316 ~ 17127448 (+)
XLOC_002028 NA coding downstream 3750 17442234 ~ 17449039 (+)
XLOC_002029 dre-mir-130c-1 coding downstream 14879 17453363 ~ 17453503 (+)
XLOC_002030 dre-mir-301c coding downstream 16006 17454490 ~ 17454572 (+)
XLOC_002031 NA coding downstream 21173 17459657 ~ 17497772 (+)
XLOC_002032 NA coding downstream 144897 17583381 ~ 17587877 (+)

Expression


Co-expression Network