Gene
RNA
| Item | Value |
|---|---|
| gene id | G75848 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 68372442 ~ 68372903 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU83847 | True | 462 | lncRNA | 0.47 | 1 | 68372442 | 68372903 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lbx1a | LOC105005765 | coding | downstream | 153900 | 68215999 ~ 68218542 (-) |
| tlx1 | LOC106576912 | coding | downstream | 203485 | 68162832 ~ 68168957 (-) |
| sdhaf4 | LOC106576700 | coding | downstream | 210418 | 68157900 ~ 68162024 (-) |
| LOC110527795 | LOC106576701 | coding | downstream | 220426 | 68142952 ~ 68152016 (-) |
| LOC110527775 | LOC106576703 | coding | downstream | 254753 | 68104128 ~ 68117689 (-) |
| cyp17a1 | cyp17a1 | coding | upstream | 28679 | 68401582 ~ 68404726 (-) |
| nt5c2a | nt5c2 | coding | upstream | 36610 | 68409513 ~ 68433891 (-) |
| pcgf6 | pcgf6 | coding | upstream | 65170 | 68438073 ~ 68444855 (-) |
| LOC110527905 | LOC106576688 | coding | upstream | 75826 | 68448729 ~ 68460372 (-) |
| calhm2.1 | calhm2 | coding | upstream | 87197 | 68460100 ~ 68463774 (-) |
| G75846 | NA | non-coding | downstream | 1499 | 68370738 ~ 68370943 (-) |
| G75764 | NA | non-coding | downstream | 86815 | 68232232 ~ 68285627 (-) |
| G75782 | NA | non-coding | downstream | 92173 | 68257605 ~ 68280269 (-) |
| G75665 | NA | non-coding | downstream | 165310 | 68206816 ~ 68207132 (-) |
| G75664 | NA | non-coding | downstream | 166382 | 68205844 ~ 68206060 (-) |
| G75852 | NA | non-coding | upstream | 4352 | 68377255 ~ 68377755 (-) |
| G75854 | NA | non-coding | upstream | 7040 | 68379943 ~ 68380183 (-) |
| G75916 | NA | non-coding | upstream | 62662 | 68435565 ~ 68437455 (-) |
| G76134 | NA | non-coding | upstream | 180314 | 68553217 ~ 68553432 (-) |
| LOC110527939 | LOC106576682 | non-coding | upstream | 196031 | 68555998 ~ 68575122 (-) |
| G75682 | NA | other | downstream | 160736 | 68210180 ~ 68211706 (-) |
| LOC110527687 | sncg | other | downstream | 690712 | 67669589 ~ 67681775 (-) |
| LOC110527584 | LOC106576720 | other | downstream | 984398 | 67386509 ~ 67389299 (-) |
| LOC110527436 | ppp2r5d | other | downstream | 1361855 | 66965664 ~ 67010646 (-) |
| LOC110527951 | coda1 | other | upstream | 202690 | 68575379 ~ 68690343 (-) |
| LOC118965321 | LOC106576963 | other | upstream | 1709937 | 70082835 ~ 70088715 (-) |
| G78414 | NA | other | upstream | 1982013 | 70354916 ~ 70355591 (-) |
| G79616 | NA | other | upstream | 2949047 | 71321950 ~ 71386523 (-) |
| G79700 | NA | other | upstream | 3096779 | 71469435 ~ 71470755 (-) |
