G75916


Basic Information

Item Value
gene id G75916
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 68435565 ~ 68437455 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU83921
AACGAACGACAGAAGAGTTGGCTAAAACACATACAGATCAGGCAACCAGGctacaaaaatatatacatttcatTAAAATATTATATTTGTTTAAATTACAAAATTATCACTCCTttcaactacctacctaccttccaTATTCCTTTCATATTACTAACAAAGACGATCTCGATTTCCACTATTTTAATTGAAACTGGAGAGTGTAGCAGTGCTCAGCTGCACATAATGCATCCCAGTAATAATGtaagatatacagtacattttcTCTGTGCCTTTAGATAACTGGCTTGCAAGCTCTGAATTTACGTTGTCTAGTTGTTTGAGTTGATATCTGCTTCATCGCTCTTCTCCACTTTTTCCTCAGTGATCTCCTTGAAGCCATCTTTCTGAGCAGCCTCTTTGTCCTTATTGGTACTCCGTGCATAGCTTGAGGCACGTGGCTGGTATCCAAAGTGACTGGTGCCATGGTTTGAGGCGCTAAAGTGAGTTTCCTCTCCCTCCAGCAGTTTTCTGTAGGCAGCTATTTCAATGTCCAGAGCCATTTTGACATTGAGCAGATCCTGGTACTCTCGAAGATGCTGAGCCATGTCATTCTTGATGTTCCGCAAATCATTGTCCAGGTGCCCAATGGTATCCTGCAAACCTGCGATTTCAAGATTGTGTCCATCTTCTGTCTCTCGAATCTGCCGTTCCAAAGACTCGTTGATGCCATGTAGGGTCTCCAACTCAATTGTCTTGGACTGCAGTTGTCTCCTGAATTCGTTGATCTCCTCCCTGCTGGCCCGCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU83921 True 787 lncRNA 0.43 3 68435565 68437455

Neighbor

gene id symbol gene type direction distance location
nt5c2a nt5c2 coding downstream 1674 68409513 ~ 68433891 (-)
cyp17a1 cyp17a1 coding downstream 30839 68401582 ~ 68404726 (-)
lbx1a LOC105005765 coding downstream 217023 68215999 ~ 68218542 (-)
tlx1 LOC106576912 coding downstream 266608 68162832 ~ 68168957 (-)
sdhaf4 LOC106576700 coding downstream 273541 68157900 ~ 68162024 (-)
pcgf6 pcgf6 coding upstream 618 68438073 ~ 68444855 (-)
LOC110527905 LOC106576688 coding upstream 11274 68448729 ~ 68460372 (-)
calhm2.1 calhm2 coding upstream 22645 68460100 ~ 68463774 (-)
LOC118965304 calhm3 coding upstream 26464 68463919 ~ 68465072 (-)
hells LOC106576686 coding upstream 29495 68466950 ~ 68476455 (-)
G75854 NA non-coding downstream 55382 68379943 ~ 68380183 (-)
G75852 NA non-coding downstream 57810 68377255 ~ 68377755 (-)
G75848 NA non-coding downstream 62662 68372442 ~ 68372903 (-)
G75846 NA non-coding downstream 64622 68370738 ~ 68370943 (-)
G75764 NA non-coding downstream 149938 68232232 ~ 68285627 (-)
G76134 NA non-coding upstream 115762 68553217 ~ 68553432 (-)
LOC110527939 LOC106576682 non-coding upstream 131479 68555998 ~ 68575122 (-)
LOC110527951 coda1 non-coding upstream 141377 68575379 ~ 68690343 (-)
G76341 NA non-coding upstream 263639 68701094 ~ 68701345 (-)
G76369 NA non-coding upstream 289813 68727268 ~ 68727552 (-)
G75682 NA other downstream 223859 68210180 ~ 68211706 (-)
LOC110527687 sncg other downstream 753835 67669589 ~ 67681775 (-)
LOC110527584 LOC106576720 other downstream 1047521 67386509 ~ 67389299 (-)
LOC110527436 ppp2r5d other downstream 1424978 66965664 ~ 67010646 (-)
LOC118965321 LOC106576963 other upstream 1645385 70082835 ~ 70088715 (-)
G78414 NA other upstream 1917461 70354916 ~ 70355591 (-)
G79616 NA other upstream 2884495 71321950 ~ 71386523 (-)
G79700 NA other upstream 3032227 71469435 ~ 71470755 (-)

Expression


Co-expression Network