G76029 (LOC106576682)


Basic Information

Item Value
gene id G76029
gene name LOC106576682
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 68573636 ~ 68574210 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU84043
CCTCAACAACATTGTGTGGTTCTGTTGATCTCTGACACCCACCTGGAGTCCTTGCGAACACGTGCCCTCTCTATGGACACATGGTGGACTCTGAAACCCCCGCAGAAGTGCCCTGAGGTGGGCTCGGCCGACACGCCCTCCTTGGCCTTGAGCCTACGGTGGACCTCCACAGCCACCCTGTGGAAGCGGGTGGGACCCTGGTTGATGACACTGAGCAGGCGGTGGCAGTTGGGAGTCAGAGGAGAGCGTCCTAGGCTGTTGTAGCCGATGGCATCCTGAAGCTTTTCTATCTGGGAAACTTTAGCCTCCAGCTCTCTCTGTAGGCTCTGCAGCTGCAGCTCCTGGGATTTTAACTCCTGGTCCCTCTGGGCCAGCTCTCCTTCCAGGTGGGCTATCCTGAGCCTCAAGGGCTCCGTGTCACACACCTTGAGGCTGGAGGCCAGGAAGCTGTCCTCTGGCCGTGGGGCTTTGATTGAACCGTTGCCCATGGCCAGCTGTTGGCTGGCCACCATAGGAAAGCTCTTGGTCACCCTCGTCTAGTCACTGATATGTCTCCGTCTGGTGAAAAGTATTTT

Function

NR:

description
cGMP-dependent protein kinase 2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84043 True 575 lncRNA 0.58 1 68573636 68574210

Neighbor

gene id symbol gene type direction distance location
LOC110527930 LOC106576683 coding upstream 25239 68519794 ~ 68548397 (+)
LOC118965305 NA coding upstream 78546 68486914 ~ 68495090 (+)
LOC118966747 NA coding upstream 118743 68454837 ~ 68454893 (+)
inaa ina coding upstream 136097 68434566 ~ 68437539 (+)
borcs7 borcs7 coding upstream 165348 68405497 ~ 68408288 (+)
LOC110528033 NA coding downstream 71562 68645772 ~ 68647556 (+)
LOC110528049 LOC106576681 coding downstream 188583 68762793 ~ 68769165 (+)
LOC110528057 LOC100136798 coding downstream 278228 68852438 ~ 68874903 (+)
LOC110528130 pla2g4f coding downstream 645512 69219722 ~ 69243901 (+)
LOC110528139 LOC106576938 coding downstream 681184 69255394 ~ 69266554 (+)
G76025 NA non-coding upstream 2576 68570848 ~ 68571060 (+)
G76016 NA non-coding upstream 18728 68554613 ~ 68554908 (+)
G75948 NA non-coding upstream 75715 68496601 ~ 68497921 (+)
G75893 NA non-coding upstream 113249 68459323 ~ 68460387 (+)
G75888 NA non-coding upstream 127984 68445398 ~ 68445652 (+)
G76028 NA non-coding downstream 509 68574719 ~ 68575049 (+)
G76212 NA non-coding downstream 122844 68697054 ~ 68697283 (+)
G76213 NA non-coding downstream 123197 68697407 ~ 68697855 (+)
G76226 NA non-coding downstream 134654 68708864 ~ 68709185 (+)
G76241 NA non-coding downstream 152707 68726917 ~ 68727135 (+)
G75747 NA other upstream 198707 68374505 ~ 68374929 (+)
G74139 NA other upstream 1788667 66784335 ~ 66784969 (+)
G74067 LOC106576735 other upstream 1814652 66756207 ~ 66758984 (+)
LOC118965274 LOC106576739 other upstream 2149555 66417495 ~ 66424081 (+)
G73515 NA other upstream 2285167 66287679 ~ 66288469 (+)
G78121 NA other downstream 1997455 70571665 ~ 70654961 (+)
ccdc85a ccdc85a other downstream 2462260 71036440 ~ 71076239 (+)
G82111 LOC106577091 other downstream 4977406 73551616 ~ 73571737 (+)
G83836 NA other downstream 6335015 74909225 ~ 74909806 (+)
G83829 NA other downstream 6538450 75112660 ~ 75114190 (+)

Expression


Co-expression Network