G77795


Basic Information

Item Value
gene id G77795
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 69957132 ~ 69959045 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU86004
CAGTTCATGATAATAATGTTGATAATAGTGTCATCAATATTGTTGACAATAATCTGACTGAAAAAATATAAAGTCTTGTTGGAATGTGTCCcatttacaacaaaaaaagtatGTCGTGGCAGAAATGAAGTTGCCACTGCCTTAATATCCCTTATCAACATGATAACTCAACCGTTTTCAAAACAAACAATAAAGCCATTTGATGTCAAGTGTGGTAACACCTGTATGTGAGTGTGAGACAAGCAGGGACTTCAGAACCTTCAACGATCAGATTATTGGTCTTCATTAGTGTAATATTATACATGCACGTGTACTGTATGTTCTCAATACCCAACACGTAAAAGCTCCAATAGAGCTACTGTTTGTAGGATCTGGCACCAAGATCAATGAGAACTCAAGCAGACCAATGTACTCTAAAAGCAGCTCAGCCATTTAGAAAATAACCTCTGTGGCATCACAACACTTTTCTGTCTTTGATTTCAGCCAGGTATGAGGATATTGTGGGTTTAAGACCTTGCAGGAACACCACATTATCCATGAGTCGTCCAGTAGCAAAGAGAGTGATATTGCTCTGACTCACTAAGCACTGAATAATTTCCATCCCTTAACTCTTGTATATGTGGCTTTGGATATCTCTTGCTAATATACACTATCTTTTCCCCATGCCCCTCCTCCAACATGGAGTGCTCTGACCCTGAGGCCCTGTTCTTGTCTCTGTCCTACTGTGTCGAACAAAAGGTCAGACCCTATTGTCTCTACAGAGATCCATGTCTAACTCACCTGCCCATACCTAGTTCTCCCTACCCTGAAGGGGGTGGAGTCCCTGCAAACAGTCTCTCTACAGATGAAAATAAACGATCTCTTCTTACGTAACCTGCTGTATCCTTGGTGATGGAGGAACTGACCTGCTCACTCAACTGATGCCTGGCAACCACAACACAATGAGCACCTGGGCTCACATCTGGTGCCACTGTAAGCAAGTTAGTAATCAGTGCTCCACTGACTGAGGGCTTAGTGGAGATTCCATTACCTCTGCCTGAAGGCAACAGGCTTGATCCTTCAGCTGATTaaaaaaaggtcaaaggtcactCAATGGCTTGTGTGGACAGTGAGACAACAACGTTGACCCTTTTCACATATTTAACCTGCATTGCTTTGAAAAATCCAGAATAGGTTGACCACTGACCAGCTTCACTAGTATTCCATGACTGTATGAAAAATCACATGCCTAAACCCATAAATATGTGTACAGTATACATAGTTCACCTTATTGTCCTGAGTGGGCACATATTACAAAGACTAGATTTCATCTTTTGAGTTCAAATCCCTTTAAAATAATAAGGCGGAAAACAATAAAGCTTTCTTGACTAACCAAAAGACACAACTATTCCTTGATTTATAAAACAAGTCTCAGTGGTTATATTGTTCTTTATCTCATGCTCACACAGCAAGTACCATTTCTTGGATTCCAGAGTAAGATACAGAACTGGCACATAAACGCTCATCAGTAGTCATGTTACAATAAACTTACCTTTAGAAACAATGTACCTGCCTCTGTTTCCCTCATCACTTTCACTTCATCTTTAACTTTCTATTGCTTTACATCTCGATCCATGTATGcattctcccatctccaattGCATTCTCACTTTACATCCCTCTCCGAGTCCATTATAAAACGTTCACTATGTTCTCAAAACGTTATTGCAACTTAGTCACGTGACCCAAATAACTTCATTTCATGGTATTATACATGCCCTTAATGATTTCTTCAGCGAATCAACAGTAGATATCACATATAGTGTATGTGCaccacagaccacacacactgtaaatagtAAGCATGTACATGCTCCGACATTCATACAGGCACAGGTGGACACCCGATCAGTCTGTCAAACACTGGTGAGCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86004 True 1914 lncRNA 0.41 1 69957132 69959045

Neighbor

gene id symbol gene type direction distance location
LOC110528285 NA coding downstream 387978 69566181 ~ 69569154 (-)
exo1 exo1 coding downstream 511399 69437322 ~ 69445733 (-)
LOC118965314 NA coding downstream 524944 69421067 ~ 69432188 (-)
si:ch211-125o16.4 LOC106576941 coding downstream 556559 69386236 ~ 69400573 (-)
LOC110528163 LOC106576940 coding downstream 594035 69288453 ~ 69363097 (-)
LOC110528376 LOC106576957 coding upstream 41272 69993128 ~ 70022403 (-)
LOC110528384 LOC106576958 coding upstream 71000 70030045 ~ 70036532 (-)
LOC118965320 LOC106576961 coding upstream 97507 70056552 ~ 70075898 (-)
LOC118965321 LOC106576963 coding upstream 123790 70082835 ~ 70088715 (-)
LOC110528401 LOC106576963 coding upstream 136644 70095689 ~ 70111417 (-)
G77836 NA non-coding downstream 2123 69954697 ~ 69955009 (-)
G77834 LOC106576952 non-coding downstream 6883 69949732 ~ 69950249 (-)
G77831 NA non-coding downstream 10321 69946319 ~ 69946811 (-)
G77830 NA non-coding downstream 11225 69945565 ~ 69945907 (-)
G77826 NA non-coding downstream 15905 69940965 ~ 69941227 (-)
G77840 fam98a non-coding upstream 4935 69963980 ~ 69970851 (-)
G77799 NA non-coding upstream 16043 69975088 ~ 69975578 (-)
G77855 NA non-coding upstream 29215 69988260 ~ 69988497 (-)
G77856 NA non-coding upstream 30031 69989076 ~ 69989577 (-)
LOC110527951 coda1 other downstream 1266903 68575379 ~ 68690343 (-)
G75682 NA other downstream 1745426 68210180 ~ 68211706 (-)
sdhaf4 LOC106576700 other downstream 1795130 68157900 ~ 68162024 (-)
LOC110527687 sncg other downstream 2275402 67669589 ~ 67681775 (-)
LOC110527584 LOC106576720 other downstream 2569088 67386509 ~ 67389299 (-)
G78414 NA other upstream 395871 70354916 ~ 70355591 (-)
G79616 NA other upstream 1362905 71321950 ~ 71386523 (-)
G79700 NA other upstream 1510637 71469435 ~ 71470755 (-)
G79904 NA other upstream 1784000 71743045 ~ 71743809 (-)

Expression


Co-expression Network