G77870



Basic Information


Item Value
gene id G77870
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 70025356 ~ 70025765 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU86082
aaataaATTGTTATAGCCTAAATCTAAACATTTTGTAAACTATTTGTgccgtgaattccatctctatcaaTTTTTTACTGAGCATTCGGCGTGATTCGCCCCTGTAAACAATCGTTTATATAGTCATGGTGggtttcagtgcattcctctggatgtttgcaacacagtCAAACGTCATTGGTTTTTTTGCAGGGAGAATTGACCGAAGTGagctgatttgaagacaacgatAAATGACTACCTTACCACCAATAATTTTAGCGAAGCTTCATTGATTGACtatatttctgcccaatgaccactgatcttcttgaaatctagctgggtagatagccattttttttttgcaatgaaatgtgtagtttgtttttgtgtgtgtgttggtttgtttgtgtgtatgtgtatatata

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU86082 True 410 lncRNA 0.47 1 70025356 70025765

Neighbor


gene id symbol gene type direction distance location
LOC110528376 LOC106576957 coding downstream 2953 69993128 ~ 70022403 (-)
LOC110528285 NA coding downstream 456202 69566181 ~ 69569154 (-)
exo1 exo1 coding downstream 579623 69437322 ~ 69445733 (-)
LOC118965314 NA coding downstream 593168 69421067 ~ 69432188 (-)
si:ch211-125o16.4 LOC106576941 coding downstream 624783 69386236 ~ 69400573 (-)
LOC110528384 LOC106576958 coding upstream 4280 70030045 ~ 70036532 (-)
LOC118965320 LOC106576961 coding upstream 30787 70056552 ~ 70075898 (-)
LOC118965321 LOC106576963 coding upstream 57070 70082835 ~ 70088715 (-)
LOC110528401 LOC106576963 coding upstream 69924 70095689 ~ 70111417 (-)
camk2g2 LOC106576966 coding upstream 379575 70405340 ~ 70512273 (-)
G77856 NA non-coding downstream 35779 69989076 ~ 69989577 (-)
G77855 NA non-coding downstream 36859 69988260 ~ 69988497 (-)
G77799 NA non-coding downstream 49778 69975088 ~ 69975578 (-)
G77840 fam98a non-coding downstream 54505 69963980 ~ 69970851 (-)
G78217 NA non-coding upstream 25253 70051018 ~ 70051230 (-)
G78218 NA non-coding upstream 26819 70052584 ~ 70053194 (-)
G78219 NA non-coding upstream 28189 70053954 ~ 70054277 (-)
G78209 NA non-coding upstream 28933 70054698 ~ 70056487 (-)
LOC110527951 coda1 other downstream 1335127 68575379 ~ 68690343 (-)
G75682 NA other downstream 1813650 68210180 ~ 68211706 (-)
sdhaf4 LOC106576700 other downstream 1863354 68157900 ~ 68162024 (-)
LOC110527687 sncg other downstream 2343626 67669589 ~ 67681775 (-)
LOC110527584 LOC106576720 other downstream 2637312 67386509 ~ 67389299 (-)
G78414 NA other upstream 329151 70354916 ~ 70355591 (-)
G79616 NA other upstream 1296185 71321950 ~ 71386523 (-)
G79700 NA other upstream 1443917 71469435 ~ 71470755 (-)
G79904 NA other upstream 1717280 71743045 ~ 71743809 (-)

Expression



Co-expression Network