G77878


Basic Information

Item Value
gene id G77878
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 70040013 ~ 70040341 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU86090
ccgatacgaggagctggtaagtaccgcaccgggctatgcacccgcactggggacaccgtgcgctccacagcataacacggtgcctgcccggtccctctcgctctccggtaagcacaggaagttggcgcaggtctcctacctggcttcgccatacttcctgtgtgccccccccgatacatttttggggctgacacTCGGGCTTCCAGCCCTGCTTCGGTGCTGCCTCTTCAAACCACCGTCTCTCCgctttggctgcctccagctctgccttgggacGGCGATGTTCCTCCGGCTGCGTCCAGGGTCCATCACCGTCCaactcgtcctcc

Function

NR:

description
PREDICTED: lysine-specific demethylase 2B-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86090 True 329 lncRNA 0.60 1 70040013 70040341

Neighbor

gene id symbol gene type direction distance location
nvl LOC106576956 coding upstream 40516 69990307 ~ 69999497 (+)
si:ch211-195b21.5 LOC106576954 coding upstream 60422 69972280 ~ 69979591 (+)
fam98a fam98a coding upstream 67939 69964060 ~ 69972074 (+)
rasgrp3 LOC106576952 coding upstream 80318 69905718 ~ 69959695 (+)
ltbp1 LOC106576950 coding upstream 136974 69771001 ~ 69903039 (+)
zgc:153981 LOC106576960 coding downstream 11142 70051483 ~ 70052917 (+)
LOC118966712 LOC105023263 coding downstream 81671 70122012 ~ 70122911 (+)
chchd1 chch1 coding downstream 96489 70136830 ~ 70143694 (+)
LOC110528418 LOC106576964 coding downstream 122850 70163191 ~ 70188938 (+)
zswim8 LOC100194729 coding downstream 153954 70194295 ~ 70228504 (+)
G77876 NA non-coding upstream 1435 70038368 ~ 70038578 (+)
G77875 NA non-coding upstream 1655 70038144 ~ 70038358 (+)
G77709 NA non-coding upstream 15628 70024091 ~ 70024385 (+)
G77684 NA non-coding upstream 58204 69981475 ~ 69981809 (+)
G77880 NA non-coding downstream 1786 70042127 ~ 70042328 (+)
G77884 NA non-coding downstream 6357 70046698 ~ 70046967 (+)
G77888 NA non-coding downstream 9708 70050049 ~ 70050319 (+)
G77890 NA non-coding downstream 14212 70054553 ~ 70056523 (+)
G77891 NA non-coding downstream 19878 70060219 ~ 70062882 (+)
G75747 NA other upstream 1665084 68374505 ~ 68374929 (+)
G74139 NA other upstream 3255044 66784335 ~ 66784969 (+)
G74067 LOC106576735 other upstream 3281029 66756207 ~ 66758984 (+)
LOC118965274 LOC106576739 other upstream 3615932 66417495 ~ 66424081 (+)
G73515 NA other upstream 3751544 66287679 ~ 66288469 (+)
G78121 NA other downstream 531324 70571665 ~ 70654961 (+)
ccdc85a ccdc85a other downstream 996129 71036440 ~ 71076239 (+)
G82111 LOC106577091 other downstream 3511275 73551616 ~ 73571737 (+)
G83836 NA other downstream 4868884 74909225 ~ 74909806 (+)
G83829 NA other downstream 5072319 75112660 ~ 75114190 (+)

Expression


Co-expression Network