Gene
RNA
| Item | Value |
|---|---|
| gene id | G77880 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 70042127 ~ 70042328 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: retinoblastoma-like protein 2 isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU86092 | True | 202 | lncRNA | 0.43 | 1 | 70042127 | 70042328 |
70,040,400
70,040,800
70,041,200
70,041,600
70,042,000
70,042,400
70,042,800
70,043,200
70,043,600
70,044,000
70,044,400
70,044,800
NC_048565.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nvl | LOC106576956 | coding | upstream | 42630 | 69990307 ~ 69999497 (+) |
| si:ch211-195b21.5 | LOC106576954 | coding | upstream | 62536 | 69972280 ~ 69979591 (+) |
| fam98a | fam98a | coding | upstream | 70053 | 69964060 ~ 69972074 (+) |
| rasgrp3 | LOC106576952 | coding | upstream | 82432 | 69905718 ~ 69959695 (+) |
| ltbp1 | LOC106576950 | coding | upstream | 139088 | 69771001 ~ 69903039 (+) |
| zgc:153981 | LOC106576960 | coding | downstream | 9155 | 70051483 ~ 70052917 (+) |
| LOC118966712 | LOC105023263 | coding | downstream | 79684 | 70122012 ~ 70122911 (+) |
| chchd1 | chch1 | coding | downstream | 94502 | 70136830 ~ 70143694 (+) |
| LOC110528418 | LOC106576964 | coding | downstream | 120863 | 70163191 ~ 70188938 (+) |
| zswim8 | LOC100194729 | coding | downstream | 151967 | 70194295 ~ 70228504 (+) |
| G77878 | NA | non-coding | upstream | 1786 | 70040013 ~ 70040341 (+) |
| G77876 | NA | non-coding | upstream | 3549 | 70038368 ~ 70038578 (+) |
| G77875 | NA | non-coding | upstream | 3769 | 70038144 ~ 70038358 (+) |
| G77709 | NA | non-coding | upstream | 17742 | 70024091 ~ 70024385 (+) |
| G77684 | NA | non-coding | upstream | 60318 | 69981475 ~ 69981809 (+) |
| G77884 | NA | non-coding | downstream | 4370 | 70046698 ~ 70046967 (+) |
| G77888 | NA | non-coding | downstream | 7721 | 70050049 ~ 70050319 (+) |
| G77890 | NA | non-coding | downstream | 12225 | 70054553 ~ 70056523 (+) |
| G77891 | NA | non-coding | downstream | 17891 | 70060219 ~ 70062882 (+) |
| G77895 | NA | non-coding | downstream | 26125 | 70068453 ~ 70068657 (+) |
| G75747 | NA | other | upstream | 1667198 | 68374505 ~ 68374929 (+) |
| G74139 | NA | other | upstream | 3257158 | 66784335 ~ 66784969 (+) |
| G74067 | LOC106576735 | other | upstream | 3283143 | 66756207 ~ 66758984 (+) |
| LOC118965274 | LOC106576739 | other | upstream | 3618046 | 66417495 ~ 66424081 (+) |
| G73515 | NA | other | upstream | 3753658 | 66287679 ~ 66288469 (+) |
| G78121 | NA | other | downstream | 529337 | 70571665 ~ 70654961 (+) |
| ccdc85a | ccdc85a | other | downstream | 994142 | 71036440 ~ 71076239 (+) |
| G82111 | LOC106577091 | other | downstream | 3509288 | 73551616 ~ 73571737 (+) |
| G83836 | NA | other | downstream | 4866897 | 74909225 ~ 74909806 (+) |
| G83829 | NA | other | downstream | 5070332 | 75112660 ~ 75114190 (+) |
