G77998


Basic Information

Item Value
gene id G77998
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 70323670 ~ 70323983 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU86244
gtgtaTGAAAGTGCATTCAAGACATGTTGGAAAGATGTCACTTCTCAGGTCCTTTCTGGTTGTGGTAACTTTAGAAAGCATTTATTTAGCTTTTCTTTATCAGACTGTTGAAAAAAAACGATGGGAGTAATTTAGTGAATTCGAAATCTTTGTTGAAAGACCCATAGGCCTAATTTTCCATCGCTTCAGTCAAGCCCTGTTGGACTATCCACTCATAGAGAGATGAGAGCCTGTTGCACTCCCCTCTCCCAAAGATTTAGGAAGTAGTGTTgtcctgtttctctcttcctgtcaATTTCTTATAAATGTCTTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86244 True 314 lncRNA 0.45 1 70323670 70323983

Neighbor

gene id symbol gene type direction distance location
zswim8 LOC100194729 coding upstream 95166 70194295 ~ 70228504 (+)
LOC110528418 LOC106576964 coding upstream 134732 70163191 ~ 70188938 (+)
chchd1 chch1 coding upstream 179976 70136830 ~ 70143694 (+)
LOC118966712 LOC105023263 coding upstream 200759 70122012 ~ 70122911 (+)
zgc:153981 LOC106576960 coding upstream 270753 70051483 ~ 70052917 (+)
kcnq5a LOC106576968 coding downstream 231719 70555702 ~ 70677281 (+)
ddx43 ddx43 coding downstream 355900 70679883 ~ 70711478 (+)
ccdc85a ccdc85a coding downstream 712457 71036440 ~ 71076239 (+)
vrk2 LOC106576978 coding downstream 924119 71248102 ~ 71266030 (+)
LOC110528637 NA coding downstream 956478 71280461 ~ 71323276 (+)
G77997 NA non-coding upstream 70 70323301 ~ 70323600 (+)
G77995 NA non-coding upstream 4094 70318720 ~ 70319576 (+)
G77991 NA non-coding upstream 16117 70307317 ~ 70307553 (+)
G77990 NA non-coding upstream 16947 70306513 ~ 70306723 (+)
G77989 NA non-coding upstream 17236 70306147 ~ 70306434 (+)
G77999 NA non-coding downstream 576 70324559 ~ 70324767 (+)
G78007 NA non-coding downstream 10383 70334366 ~ 70334602 (+)
G78010 NA non-coding downstream 12665 70336648 ~ 70336934 (+)
G78014 NA non-coding downstream 31279 70355262 ~ 70355658 (+)
G78016 NA non-coding downstream 32999 70356982 ~ 70357204 (+)
G75747 NA other upstream 1948741 68374505 ~ 68374929 (+)
G74139 NA other upstream 3538701 66784335 ~ 66784969 (+)
G74067 LOC106576735 other upstream 3564686 66756207 ~ 66758984 (+)
LOC118965274 LOC106576739 other upstream 3899589 66417495 ~ 66424081 (+)
G73515 NA other upstream 4035201 66287679 ~ 66288469 (+)
G78121 NA other downstream 247682 70571665 ~ 70654961 (+)
G82111 LOC106577091 other downstream 3227633 73551616 ~ 73571737 (+)
G83836 NA other downstream 4585242 74909225 ~ 74909806 (+)
G83829 NA other downstream 4788677 75112660 ~ 75114190 (+)

Expression


Co-expression Network