G78016


Basic Information

Item Value
gene id G78016
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 70356982 ~ 70357204 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU86262
ggcaattccatatgagaaattgccaagaaactgaagatctcgtacaacgctgtgtactactcccttcacagaacagcgcaaacgggctctaaccagaatggaaaggagtgggaggccccggtgcacacctgagcaagaggacatgtacattagtgtctagtttgagaaacagatgcctcacaagtcctcaactggcagcttcattaaatagtacccgcaaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86262 True 223 lncRNA 0.37 1 70356982 70357204

Neighbor

gene id symbol gene type direction distance location
zswim8 LOC100194729 coding upstream 128478 70194295 ~ 70228504 (+)
LOC110528418 LOC106576964 coding upstream 168044 70163191 ~ 70188938 (+)
chchd1 chch1 coding upstream 213288 70136830 ~ 70143694 (+)
LOC118966712 LOC105023263 coding upstream 234071 70122012 ~ 70122911 (+)
zgc:153981 LOC106576960 coding upstream 304065 70051483 ~ 70052917 (+)
kcnq5a LOC106576968 coding downstream 198498 70555702 ~ 70677281 (+)
ddx43 ddx43 coding downstream 322679 70679883 ~ 70711478 (+)
ccdc85a ccdc85a coding downstream 679236 71036440 ~ 71076239 (+)
vrk2 LOC106576978 coding downstream 890898 71248102 ~ 71266030 (+)
LOC110528637 NA coding downstream 923257 71280461 ~ 71323276 (+)
G78014 NA non-coding upstream 1324 70355262 ~ 70355658 (+)
G78010 NA non-coding upstream 20048 70336648 ~ 70336934 (+)
G78007 NA non-coding upstream 22380 70334366 ~ 70334602 (+)
G77999 NA non-coding upstream 32215 70324559 ~ 70324767 (+)
G77998 NA non-coding upstream 32999 70323670 ~ 70323983 (+)
G78098 NA non-coding downstream 183917 70541121 ~ 70541616 (+)
G78120 NA non-coding downstream 214300 70571504 ~ 70681365 (+)
G78198 NA non-coding downstream 358322 70715526 ~ 70726790 (+)
G78649 NA non-coding downstream 391968 70749172 ~ 70749562 (+)
G75747 NA other upstream 1982053 68374505 ~ 68374929 (+)
G74139 NA other upstream 3572013 66784335 ~ 66784969 (+)
G74067 LOC106576735 other upstream 3597998 66756207 ~ 66758984 (+)
LOC118965274 LOC106576739 other upstream 3932901 66417495 ~ 66424081 (+)
G73515 NA other upstream 4068513 66287679 ~ 66288469 (+)
G78121 NA other downstream 214461 70571665 ~ 70654961 (+)
G82111 LOC106577091 other downstream 3194412 73551616 ~ 73571737 (+)
G83836 NA other downstream 4552021 74909225 ~ 74909806 (+)
G83829 NA other downstream 4755456 75112660 ~ 75114190 (+)

Expression


Co-expression Network