Gene
RNA
| Item | Value |
|---|---|
| gene id | G78198 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 70715526 ~ 70726790 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| elongation factor 1-alpha 1-like isoform X1 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU86464 | True | 1320 | lncRNA | 0.50 | 6 | 70715526 | 70726790 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ddx43 | ddx43 | coding | upstream | 4048 | 70679883 ~ 70711478 (+) |
| kcnq5a | LOC106576968 | coding | upstream | 38335 | 70555702 ~ 70677281 (+) |
| LOC110528470 | LOC106576965 | coding | upstream | 310903 | 70229959 ~ 70404623 (+) |
| zswim8 | LOC100194729 | coding | upstream | 487022 | 70194295 ~ 70228504 (+) |
| LOC110528418 | LOC106576964 | coding | upstream | 526588 | 70163191 ~ 70188938 (+) |
| ccdc85a | ccdc85a | coding | downstream | 309650 | 71036440 ~ 71076239 (+) |
| vrk2 | LOC106576978 | coding | downstream | 521312 | 71248102 ~ 71266030 (+) |
| LOC110528637 | NA | coding | downstream | 553671 | 71280461 ~ 71323276 (+) |
| asrgl1 | LOC106576984 | coding | downstream | 1238000 | 71964790 ~ 71978789 (+) |
| LOC110528701 | LOC106576988 | coding | downstream | 1281717 | 72008507 ~ 72040224 (+) |
| G78120 | NA | non-coding | upstream | 34161 | 70571504 ~ 70681365 (+) |
| G78098 | NA | non-coding | upstream | 173910 | 70541121 ~ 70541616 (+) |
| G78016 | NA | non-coding | upstream | 358322 | 70356982 ~ 70357204 (+) |
| G78014 | NA | non-coding | upstream | 359868 | 70355262 ~ 70355658 (+) |
| G78649 | NA | non-coding | downstream | 22382 | 70749172 ~ 70749562 (+) |
| G78666 | LOC106576973 | non-coding | downstream | 45305 | 70772095 ~ 70774313 (+) |
| G78728 | NA | non-coding | downstream | 135894 | 70862684 ~ 70866754 (+) |
| G78992 | NA | non-coding | downstream | 274037 | 71000827 ~ 71001055 (+) |
| G78996 | NA | non-coding | downstream | 276411 | 71003201 ~ 71003514 (+) |
| G78121 | NA | other | upstream | 60565 | 70571665 ~ 70654961 (+) |
| G75747 | NA | other | upstream | 2340597 | 68374505 ~ 68374929 (+) |
| G74139 | NA | other | upstream | 3930557 | 66784335 ~ 66784969 (+) |
| G74067 | LOC106576735 | other | upstream | 3956542 | 66756207 ~ 66758984 (+) |
| LOC118965274 | LOC106576739 | other | upstream | 4291445 | 66417495 ~ 66424081 (+) |
| G82111 | LOC106577091 | other | downstream | 2824826 | 73551616 ~ 73571737 (+) |
| G83836 | NA | other | downstream | 4182435 | 74909225 ~ 74909806 (+) |
| G83829 | NA | other | downstream | 4385870 | 75112660 ~ 75114190 (+) |
| G83979 | NA | other | downstream | 4418074 | 75144864 ~ 75145512 (+) |
