XLOC_020287



Basic Information


Item Value
gene id XLOC_020287
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 14300668 ~ 14301629 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00042100
GAAGAACACAGTTAAGGAAGCAGGTTTGCACCAATTCAAACAAAGCGGATGCAGTTCTTTATCACAGGCATACCGTCCATTCCATTTCGACGCAGCACATGCAACATAGTCACCATCAATGAAATATATGCAGATCCACACGACAGGCGGAATCAGACAAGCCAACAAAACCCATTCACAGCTCTCCTTGGTTTGTGACCGAGTTTCTCCACTTTCATTCTGCCCTTTTTTCTCTTGTTCTTGACATCTGTTGTCGTTTTTCTTAGAACTTCCTCCACATTTAGATTTTTGACAACAGCTAcaggttgtgtatatatgcttaTATTTCCAAGGTTTTAGTAGCATAAGCATTATgacaaaagcaaaaaaagcagGAACAACGAGGACAAAAATGGATAAAGTTACATTCCAAACATATTTGCAAGGGCATGAGAAATGCACATTAATCAGCGCCTGCAAACCTACTAACAAAAAGCTCATTGGAACCGAG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00042100 True 490 lncRNA 0.40 2 14300668 14301629

Neighbor


gene id symbol gene type direction distance location
XLOC_020286 CU104782.2 coding upstream 48138 14252414 ~ 14252530 (+)
XLOC_020285 NA coding upstream 120797 14175386 ~ 14179871 (+)
XLOC_020284 bzw1a coding upstream 174603 14117078 ~ 14126065 (+)
XLOC_020283 he1.3 coding upstream 197035 14102397 ~ 14103633 (+)
XLOC_020282 he1.2 coding upstream 201269 14098028 ~ 14099399 (+)
XLOC_020288 CU137716.1 coding downstream 188129 14489758 ~ 14494371 (+)
XLOC_020289 gtpbp1l coding downstream 534411 14836040 ~ 14854420 (+)
XLOC_020290 NA coding downstream 578235 14879864 ~ 14881426 (+)
XLOC_020291 NA coding downstream 690055 14991684 ~ 15010688 (+)
XLOC_020292 NA coding downstream 756560 15058189 ~ 15065952 (+)
XLOC_020278 NA non-coding upstream 318766 13968425 ~ 13981902 (+)
XLOC_020276 NA non-coding upstream 497041 13799220 ~ 13803627 (+)
XLOC_020275 NA non-coding upstream 533358 13763399 ~ 13767310 (+)
XLOC_020293 NA non-coding downstream 797841 15099470 ~ 15101426 (+)

Expression



Co-expression Network