Gene
RNA
| Item | Value |
|---|---|
| gene id | G79432 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 71032936 ~ 71033152 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: RNA-directed DNA polymerase homolog, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU87799 | True | 217 | lncRNA | 0.44 | 1 | 71032936 | 71033152 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| soul2 | LOC106576976 | coding | downstream | 9063 | 71020483 ~ 71023873 (-) |
| slc24a3 | LOC106576975 | coding | downstream | 70957 | 70863113 ~ 70961979 (-) |
| si:dkey-187a12.4 | LOC106576974 | coding | downstream | 175168 | 70851922 ~ 70857768 (-) |
| rin2 | LOC106576973 | coding | downstream | 192230 | 70772035 ~ 70840706 (-) |
| LOC110521978 | LOC106576971 | coding | downstream | 266441 | 70760735 ~ 70766495 (-) |
| LOC110532621 | LOC106577071 | coding | upstream | 77698 | 71110850 ~ 71113278 (-) |
| fancl | fancl | coding | upstream | 231811 | 71263171 ~ 71282788 (-) |
| LOC110532628 | NA | coding | upstream | 642879 | 71676031 ~ 71683123 (-) |
| LOC118966745 | NA | coding | upstream | 775787 | 71808939 ~ 71808991 (-) |
| bcl11aa | bcl11a | coding | upstream | 791241 | 71824393 ~ 71872192 (-) |
| G79423 | NA | non-coding | downstream | 13134 | 71019579 ~ 71019802 (-) |
| G78995 | NA | non-coding | downstream | 30394 | 71002317 ~ 71002542 (-) |
| G78910 | NA | non-coding | downstream | 130724 | 70900815 ~ 70902212 (-) |
| G78855 | NA | non-coding | downstream | 155900 | 70823141 ~ 70877036 (-) |
| G78874 | NA | non-coding | downstream | 183399 | 70848696 ~ 70849537 (-) |
| G79463 | NA | non-coding | upstream | 47109 | 71080261 ~ 71080561 (-) |
| G79493 | NA | non-coding | upstream | 85488 | 71118640 ~ 71127069 (-) |
| G79503 | NA | non-coding | upstream | 102238 | 71135390 ~ 71156648 (-) |
| G79513 | NA | non-coding | upstream | 113916 | 71147068 ~ 71148132 (-) |
| G79538 | NA | non-coding | upstream | 152806 | 71185958 ~ 71186500 (-) |
| G78414 | NA | other | downstream | 677345 | 70354916 ~ 70355591 (-) |
| LOC118965321 | LOC106576963 | other | downstream | 944222 | 70082835 ~ 70088715 (-) |
| LOC110527951 | coda1 | other | downstream | 2342707 | 68575379 ~ 68690343 (-) |
| G75682 | NA | other | downstream | 2821230 | 68210180 ~ 68211706 (-) |
| sdhaf4 | LOC106576700 | other | downstream | 2870934 | 68157900 ~ 68162024 (-) |
| G79616 | NA | other | upstream | 288798 | 71321950 ~ 71386523 (-) |
| G79700 | NA | other | upstream | 436530 | 71469435 ~ 71470755 (-) |
| G79904 | NA | other | upstream | 709893 | 71743045 ~ 71743809 (-) |
| G80957 | NA | other | upstream | 1174777 | 72207929 ~ 72211089 (-) |
| LOC110528794 | LOC106576993 | other | upstream | 1215452 | 72202814 ~ 72251918 (-) |
