Gene
RNA
| Item | Value |
|---|---|
| gene id | G79037 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 71046714 ~ 71049750 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: adenomatous polyposis coli protein 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU87364 | True | 240 | lncRNA | 0.36 | 2 | 71046714 | 71049750 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ddx43 | ddx43 | coding | upstream | 335236 | 70679883 ~ 70711478 (+) |
| kcnq5a | LOC106576968 | coding | upstream | 369523 | 70555702 ~ 70677281 (+) |
| LOC110528470 | LOC106576965 | coding | upstream | 642091 | 70229959 ~ 70404623 (+) |
| zswim8 | LOC100194729 | coding | upstream | 818210 | 70194295 ~ 70228504 (+) |
| LOC110528418 | LOC106576964 | coding | upstream | 857776 | 70163191 ~ 70188938 (+) |
| vrk2 | LOC106576978 | coding | downstream | 198352 | 71248102 ~ 71266030 (+) |
| LOC110528637 | NA | coding | downstream | 230711 | 71280461 ~ 71323276 (+) |
| asrgl1 | LOC106576984 | coding | downstream | 915040 | 71964790 ~ 71978789 (+) |
| LOC110528701 | LOC106576988 | coding | downstream | 958757 | 72008507 ~ 72040224 (+) |
| tp53bp2a | NA | coding | downstream | 1066932 | 72116682 ~ 72167413 (+) |
| G79022 | NA | non-coding | upstream | 17738 | 71028454 ~ 71028976 (+) |
| G79020 | NA | non-coding | upstream | 20194 | 71026308 ~ 71026520 (+) |
| G79014 | NA | non-coding | upstream | 24747 | 71020483 ~ 71021967 (+) |
| G79008 | NA | non-coding | upstream | 31095 | 71015271 ~ 71015619 (+) |
| G78996 | NA | non-coding | upstream | 43200 | 71003201 ~ 71003514 (+) |
| G79061 | NA | non-coding | downstream | 29877 | 71079627 ~ 71079886 (+) |
| G79063 | NA | non-coding | downstream | 31920 | 71081670 ~ 71081925 (+) |
| G79091 | NA | non-coding | downstream | 65548 | 71115298 ~ 71153941 (+) |
| G79094 | NA | non-coding | downstream | 69389 | 71119139 ~ 71127473 (+) |
| G79270 | NA | non-coding | downstream | 358591 | 71408341 ~ 71408790 (+) |
| G78121 | NA | other | upstream | 391753 | 70571665 ~ 70654961 (+) |
| G75747 | NA | other | upstream | 2671785 | 68374505 ~ 68374929 (+) |
| G74139 | NA | other | upstream | 4261745 | 66784335 ~ 66784969 (+) |
| G74067 | LOC106576735 | other | upstream | 4287730 | 66756207 ~ 66758984 (+) |
| LOC118965274 | LOC106576739 | other | upstream | 4622633 | 66417495 ~ 66424081 (+) |
| G82111 | LOC106577091 | other | downstream | 2501866 | 73551616 ~ 73571737 (+) |
| G83836 | NA | other | downstream | 3859475 | 74909225 ~ 74909806 (+) |
| G83829 | NA | other | downstream | 4062910 | 75112660 ~ 75114190 (+) |
| G83979 | NA | other | downstream | 4095114 | 75144864 ~ 75145512 (+) |
| LOC110529610 | NA | other | downstream | 5408374 | 76457821 ~ 76459823 (+) |
