G79797


Basic Information

Item Value
gene id G79797
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 71638741 ~ 71639418 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU88195
GCACAgcaaggaggagggagaaaggagtcGATGGAAGGAAGGATTggagaaagggaagagaagaAACATGAAAAAGAACAAGATTAGAACCACAAAATGAACAGATTTAAACTCAAGAAGGTTATAATCCCAACAACAAACGTagcatgatgatgatgttgatgacgATGCCAATGATGATGAGTGAGAGCTGAACCATAAATACTAGGGGAGgatgtctttctctgcctcttcaTGTGCTCCTCGCTGGCATACCATAATACCATAATAACAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88195 True 276 lncRNA 0.42 2 71638741 71639418

Neighbor

gene id symbol gene type direction distance location
LOC110528637 NA coding upstream 315465 71280461 ~ 71323276 (+)
vrk2 LOC106576978 coding upstream 372711 71248102 ~ 71266030 (+)
ccdc85a ccdc85a coding upstream 562502 71036440 ~ 71076239 (+)
ddx43 ddx43 coding upstream 927263 70679883 ~ 70711478 (+)
kcnq5a LOC106576968 coding upstream 961550 70555702 ~ 70677281 (+)
asrgl1 LOC106576984 coding downstream 325372 71964790 ~ 71978789 (+)
LOC110528701 LOC106576988 coding downstream 369089 72008507 ~ 72040224 (+)
tp53bp2a NA coding downstream 477264 72116682 ~ 72167413 (+)
LOC110532645 NA coding downstream 582899 72222317 ~ 72239625 (+)
LOC118965495 NA coding downstream 589132 72227445 ~ 72229153 (+)
G79792 NA non-coding upstream 7268 71631248 ~ 71631473 (+)
G79785 NA non-coding upstream 10854 71627687 ~ 71627887 (+)
G79777 NA non-coding upstream 16356 71622120 ~ 71622385 (+)
G79779 NA non-coding upstream 19244 71619267 ~ 71619497 (+)
G79778 NA non-coding upstream 20625 71617860 ~ 71618116 (+)
G79838 NA non-coding downstream 33862 71673280 ~ 71673502 (+)
G79855 NA non-coding downstream 55528 71694946 ~ 71695255 (+)
G79880 NA non-coding downstream 85525 71724943 ~ 71725247 (+)
G79882 NA non-coding downstream 85897 71725315 ~ 71725519 (+)
G79895 NA non-coding downstream 98293 71737711 ~ 71738333 (+)
G78121 NA other upstream 983780 70571665 ~ 70654961 (+)
G75747 NA other upstream 3263812 68374505 ~ 68374929 (+)
G74139 NA other upstream 4853772 66784335 ~ 66784969 (+)
G74067 LOC106576735 other upstream 4879757 66756207 ~ 66758984 (+)
G82111 LOC106577091 other downstream 1912198 73551616 ~ 73571737 (+)
G83836 NA other downstream 3269807 74909225 ~ 74909806 (+)
G83829 NA other downstream 3473242 75112660 ~ 75114190 (+)
G83979 NA other downstream 3505446 75144864 ~ 75145512 (+)
LOC110529610 NA other downstream 4818706 76457821 ~ 76459823 (+)

Expression


Co-expression Network