G79969


Basic Information

Item Value
gene id G79969
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 71797630 ~ 71797884 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU88370
CTCTCAAGCAGCTCACTCCACTACCCATCCCCCACACCCGAAATGAGAGTCAAGGGGTGAtgaactctatctctctctggaaCTTTTCTTAACCTGTTCTGATTGGTTGACAAGATCCCAGCTTAGGACTTTGACCCCATGTATTATCTCTTTGTTACAATATGCAATGACAATTTGATGGCCAAATATTAGAATAAAGTTGCTGTTCATTAGTGGTTATATCCTACATTTAATGACAGCTATTTCTACCCACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88370 True 255 lncRNA 0.39 1 71797630 71797884

Neighbor

gene id symbol gene type direction distance location
LOC110528637 NA coding upstream 474354 71280461 ~ 71323276 (+)
vrk2 LOC106576978 coding upstream 531600 71248102 ~ 71266030 (+)
ccdc85a ccdc85a coding upstream 721391 71036440 ~ 71076239 (+)
ddx43 ddx43 coding upstream 1086152 70679883 ~ 70711478 (+)
kcnq5a LOC106576968 coding upstream 1120439 70555702 ~ 70677281 (+)
asrgl1 LOC106576984 coding downstream 166906 71964790 ~ 71978789 (+)
LOC110528701 LOC106576988 coding downstream 210623 72008507 ~ 72040224 (+)
tp53bp2a NA coding downstream 318798 72116682 ~ 72167413 (+)
LOC110532645 NA coding downstream 424433 72222317 ~ 72239625 (+)
LOC118965495 NA coding downstream 430666 72227445 ~ 72229153 (+)
G79895 NA non-coding upstream 59297 71737711 ~ 71738333 (+)
G79882 NA non-coding upstream 72111 71725315 ~ 71725519 (+)
G79880 NA non-coding upstream 72383 71724943 ~ 71725247 (+)
G79855 NA non-coding upstream 102375 71694946 ~ 71695255 (+)
G79838 NA non-coding upstream 124128 71673280 ~ 71673502 (+)
G79981 NA non-coding downstream 11830 71809714 ~ 71809915 (+)
G79991 NA non-coding downstream 38721 71836605 ~ 71836853 (+)
G79996 NA non-coding downstream 50446 71848330 ~ 71867567 (+)
G80024 NA non-coding downstream 73854 71871738 ~ 71872032 (+)
G80033 NA non-coding downstream 83441 71881325 ~ 71973430 (+)
G78121 NA other upstream 1142669 70571665 ~ 70654961 (+)
G75747 NA other upstream 3422701 68374505 ~ 68374929 (+)
G74139 NA other upstream 5012661 66784335 ~ 66784969 (+)
G74067 LOC106576735 other upstream 5038646 66756207 ~ 66758984 (+)
G82111 LOC106577091 other downstream 1753732 73551616 ~ 73571737 (+)
G83836 NA other downstream 3111341 74909225 ~ 74909806 (+)
G83829 NA other downstream 3314776 75112660 ~ 75114190 (+)
G83979 NA other downstream 3346980 75144864 ~ 75145512 (+)
LOC110529610 NA other downstream 4660240 76457821 ~ 76459823 (+)

Expression


Co-expression Network