XLOC_020292


Basic Information

Item Value
gene id XLOC_020292
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 15058189 ~ 15065952 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041892
AAATCCCTTTGGAACTAATCTAAAGCTACATAGCAAATACAAGCAGTAAGTAAAAACGTGATTACCTTGAACAAGTGACTGTTACAAATCTCTCGCTTGCATAAAGCTCAGCGTTTCCTAATTTCTGATGCTCTGTAGTTCTTCTCTGCTGTCAATCCCAGTGCAGCTTGACTCCCATAGAGACTGAATTGGAAAGCCTCACACACGGTCCTCTCACTCCGCATGAGTGGACAAGAAGAGTATGAGCATGTTGAAAACATGGACTGTGAGATTGGCTTTTGGAACCCTTCATCAATAGCTCCTACTGTTACAAAGAAAAAATCCTTTTAGTCGCGACTGTCAGCTGTTCGTCTGCCGAGGTGAAGCCGTTCAGTCGCGTCGAGGGAACCCAAGATGCTTCTAATTACAGCAAGACAGCAGCTTCATTAGCCAGGAGTCCTGCTGAAGAGATTTACACTTCAAAGGACGGAAAGCGAGAGCGAGGGAcggagagagaaacagagagcaCTATGGGGAGGCTACTTACGATGACAGAAGCCAAAGAACAAGTGCTGAAGGGATACTAAGGATTGGGACGCCGAACATAAGGTGTGGACATATGAGGGGGGGAAAGCAGACGGAAAGATGTAGAAGACGAGAATTGCAAATGGTTTAATGGCTTTAACAACCAATGACGTCATGTGTTAAGGGACTAATTATAGTGAACGGATTGAAGTGGGGACGGGATTGGGACTGACCAAACACATCAATGGTATTAAAAGAAACGCTCCTTGGTGTGTTTCTTGTGATTGCAtttcataaatacacacatacccTCATACTTGTTTTGGTGGTTTTTGAGTACTCTCAGATGgtgtaatgtattatatattgtatacgCCGCTTATTTTATTGCCTTGTCGTCTttct

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041892 True 909 lncRNA 0.44 2 15058189 15065952

Neighbor

gene id symbol gene type direction distance location
XLOC_020291 NA coding upstream 47501 14991684 ~ 15010688 (+)
XLOC_020290 NA coding upstream 176763 14879864 ~ 14881426 (+)
XLOC_020289 gtpbp1l coding upstream 203769 14836040 ~ 14854420 (+)
XLOC_020288 CU137716.1 coding upstream 563818 14489758 ~ 14494371 (+)
XLOC_020287 NA coding upstream 756560 14300668 ~ 14301629 (+)
XLOC_020293 NA coding downstream 33518 15099470 ~ 15101426 (+)
XLOC_020294 sult3st3 coding downstream 242574 15308526 ~ 15314114 (+)
XLOC_020295 sult3st3 coding downstream 249703 15315655 ~ 15318280 (+)
XLOC_020296 sult3st5 coding downstream 257978 15323930 ~ 15327809 (+)
XLOC_020297 sult3st4 coding downstream 265262 15331214 ~ 15336381 (+)
XLOC_020286 CU104782.2 non-coding upstream 805659 14252414 ~ 14252530 (+)
XLOC_020300 NA non-coding downstream 292207 15358159 ~ 15360184 (+)
XLOC_020306 BX323550.1 non-coding downstream 667015 15732967 ~ 15734843 (+)
XLOC_020308 BX323550.5 non-coding downstream 722029 15787981 ~ 15937268 (+)
XLOC_020313 CR751228.1 non-coding downstream 1211546 16277498 ~ 16277625 (+)

Expression


Co-expression Network