G79981


Basic Information

Item Value
gene id G79981
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 71809714 ~ 71809915 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU88382
AGAGTCTCACAGACACTGAATCACAAGTAAACAAAATACTAATTACCACAGAACAGAACTATCGATCTCCACACATGGAATACTACTCCCTTAGCACTAAATATTATTGCATATCCCTTAGTACTACATATAATCCTCAAAATATGCCCTTCTACCATGTCAGGATTATTTTGGTTAATGATGAATAATGCATGAATATCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88382 True 202 lncRNA 0.40 1 71809714 71809915

Neighbor

gene id symbol gene type direction distance location
LOC110528637 NA coding upstream 486438 71280461 ~ 71323276 (+)
vrk2 LOC106576978 coding upstream 543684 71248102 ~ 71266030 (+)
ccdc85a ccdc85a coding upstream 733475 71036440 ~ 71076239 (+)
ddx43 ddx43 coding upstream 1098236 70679883 ~ 70711478 (+)
kcnq5a LOC106576968 coding upstream 1132523 70555702 ~ 70677281 (+)
asrgl1 LOC106576984 coding downstream 154875 71964790 ~ 71978789 (+)
LOC110528701 LOC106576988 coding downstream 198592 72008507 ~ 72040224 (+)
tp53bp2a NA coding downstream 306767 72116682 ~ 72167413 (+)
LOC110532645 NA coding downstream 412402 72222317 ~ 72239625 (+)
LOC118965495 NA coding downstream 418635 72227445 ~ 72229153 (+)
G79969 NA non-coding upstream 11830 71797630 ~ 71797884 (+)
G79895 NA non-coding upstream 71381 71737711 ~ 71738333 (+)
G79882 NA non-coding upstream 84195 71725315 ~ 71725519 (+)
G79880 NA non-coding upstream 84467 71724943 ~ 71725247 (+)
G79855 NA non-coding upstream 114459 71694946 ~ 71695255 (+)
G79991 NA non-coding downstream 26690 71836605 ~ 71836853 (+)
G79996 NA non-coding downstream 38415 71848330 ~ 71867567 (+)
G80024 NA non-coding downstream 61823 71871738 ~ 71872032 (+)
G80033 NA non-coding downstream 71410 71881325 ~ 71973430 (+)
G80038 NA non-coding downstream 86325 71896240 ~ 71898391 (+)
G78121 NA other upstream 1154753 70571665 ~ 70654961 (+)
G75747 NA other upstream 3434785 68374505 ~ 68374929 (+)
G74139 NA other upstream 5024745 66784335 ~ 66784969 (+)
G74067 LOC106576735 other upstream 5050730 66756207 ~ 66758984 (+)
G82111 LOC106577091 other downstream 1741701 73551616 ~ 73571737 (+)
G83836 NA other downstream 3099310 74909225 ~ 74909806 (+)
G83829 NA other downstream 3302745 75112660 ~ 75114190 (+)
G83979 NA other downstream 3334949 75144864 ~ 75145512 (+)
LOC110529610 NA other downstream 4648209 76457821 ~ 76459823 (+)

Expression


Co-expression Network