G79991


Basic Information

Item Value
gene id G79991
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 71836605 ~ 71836853 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU88393
GACCAACTCCGCAAATATATTACCTTCAATTAAAAGGGTGTCCTGCAAATGTTCTATAACACTCAATTCTGTGAAAGCAAAAGTTATCCTGATCTTTATCACCATCATAACTAATTCTAGGTCACTAGGTAAAGCCCTCCACTCCGGCATAGTGAGTCTAGTCTGTATTCTGTCGACCCGGCGCAGCTGCTCATGgtccacagaaacacacacacgcatctttGTCCTGGCCCAGACTCTCAGTGGTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88393 True 249 lncRNA 0.45 1 71836605 71836853

Neighbor

gene id symbol gene type direction distance location
LOC110528637 NA coding upstream 513329 71280461 ~ 71323276 (+)
vrk2 LOC106576978 coding upstream 570575 71248102 ~ 71266030 (+)
ccdc85a ccdc85a coding upstream 760366 71036440 ~ 71076239 (+)
ddx43 ddx43 coding upstream 1125127 70679883 ~ 70711478 (+)
kcnq5a LOC106576968 coding upstream 1159414 70555702 ~ 70677281 (+)
asrgl1 LOC106576984 coding downstream 127937 71964790 ~ 71978789 (+)
LOC110528701 LOC106576988 coding downstream 171654 72008507 ~ 72040224 (+)
tp53bp2a NA coding downstream 279829 72116682 ~ 72167413 (+)
LOC110532645 NA coding downstream 385464 72222317 ~ 72239625 (+)
LOC118965495 NA coding downstream 391697 72227445 ~ 72229153 (+)
G79981 NA non-coding upstream 26690 71809714 ~ 71809915 (+)
G79969 NA non-coding upstream 38721 71797630 ~ 71797884 (+)
G79895 NA non-coding upstream 98272 71737711 ~ 71738333 (+)
G79882 NA non-coding upstream 111086 71725315 ~ 71725519 (+)
G79880 NA non-coding upstream 111358 71724943 ~ 71725247 (+)
G79996 NA non-coding downstream 11477 71848330 ~ 71867567 (+)
G80024 NA non-coding downstream 34885 71871738 ~ 71872032 (+)
G80033 NA non-coding downstream 44472 71881325 ~ 71973430 (+)
G80038 NA non-coding downstream 59387 71896240 ~ 71898391 (+)
G80061 NA non-coding downstream 107797 71944650 ~ 71945315 (+)
G78121 NA other upstream 1181644 70571665 ~ 70654961 (+)
G75747 NA other upstream 3461676 68374505 ~ 68374929 (+)
G74139 NA other upstream 5051636 66784335 ~ 66784969 (+)
G74067 LOC106576735 other upstream 5077621 66756207 ~ 66758984 (+)
G82111 LOC106577091 other downstream 1714763 73551616 ~ 73571737 (+)
G83836 NA other downstream 3072372 74909225 ~ 74909806 (+)
G83829 NA other downstream 3275807 75112660 ~ 75114190 (+)
G83979 NA other downstream 3308011 75144864 ~ 75145512 (+)
LOC110529610 NA other downstream 4621271 76457821 ~ 76459823 (+)

Expression


Co-expression Network