Gene
RNA
| Item | Value |
|---|---|
| gene id | G79996 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 71848330 ~ 71867567 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU88399 | False | 347 | lncRNA | 0.36 | 2 | 71848330 | 71867567 |
| TU88403 | True | 351 | lncRNA | 0.37 | 2 | 71848330 | 71867567 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528637 | NA | coding | upstream | 525054 | 71280461 ~ 71323276 (+) |
| vrk2 | LOC106576978 | coding | upstream | 582300 | 71248102 ~ 71266030 (+) |
| ccdc85a | ccdc85a | coding | upstream | 772091 | 71036440 ~ 71076239 (+) |
| ddx43 | ddx43 | coding | upstream | 1136852 | 70679883 ~ 70711478 (+) |
| kcnq5a | LOC106576968 | coding | upstream | 1171139 | 70555702 ~ 70677281 (+) |
| asrgl1 | LOC106576984 | coding | downstream | 97223 | 71964790 ~ 71978789 (+) |
| LOC110528701 | LOC106576988 | coding | downstream | 140940 | 72008507 ~ 72040224 (+) |
| tp53bp2a | NA | coding | downstream | 249115 | 72116682 ~ 72167413 (+) |
| LOC110532645 | NA | coding | downstream | 354750 | 72222317 ~ 72239625 (+) |
| LOC118965495 | NA | coding | downstream | 360983 | 72227445 ~ 72229153 (+) |
| G79991 | NA | non-coding | upstream | 11477 | 71836605 ~ 71836853 (+) |
| G79981 | NA | non-coding | upstream | 38415 | 71809714 ~ 71809915 (+) |
| G79969 | NA | non-coding | upstream | 50446 | 71797630 ~ 71797884 (+) |
| G79895 | NA | non-coding | upstream | 109997 | 71737711 ~ 71738333 (+) |
| G79882 | NA | non-coding | upstream | 122811 | 71725315 ~ 71725519 (+) |
| G80024 | NA | non-coding | downstream | 4171 | 71871738 ~ 71872032 (+) |
| G80033 | NA | non-coding | downstream | 13758 | 71881325 ~ 71973430 (+) |
| G80038 | NA | non-coding | downstream | 28673 | 71896240 ~ 71898391 (+) |
| G80061 | NA | non-coding | downstream | 77083 | 71944650 ~ 71945315 (+) |
| G80296 | NA | non-coding | downstream | 256092 | 72123659 ~ 72123890 (+) |
| G78121 | NA | other | upstream | 1193369 | 70571665 ~ 70654961 (+) |
| G75747 | NA | other | upstream | 3473401 | 68374505 ~ 68374929 (+) |
| G74139 | NA | other | upstream | 5063361 | 66784335 ~ 66784969 (+) |
| G74067 | LOC106576735 | other | upstream | 5089346 | 66756207 ~ 66758984 (+) |
| G82111 | LOC106577091 | other | downstream | 1684049 | 73551616 ~ 73571737 (+) |
| G83836 | NA | other | downstream | 3041658 | 74909225 ~ 74909806 (+) |
| G83829 | NA | other | downstream | 3245093 | 75112660 ~ 75114190 (+) |
| G83979 | NA | other | downstream | 3277297 | 75144864 ~ 75145512 (+) |
| LOC110529610 | NA | other | downstream | 4590557 | 76457821 ~ 76459823 (+) |
