XLOC_020293



Basic Information


Item Value
gene id XLOC_020293
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 15099470 ~ 15101426 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00041893
acaagctaaaataaatgaatatctgTGGCTCCTGATGTCGTTAGGAATTGAAATCattggtctgtgcaagaaactaaacattatttcCATTTGTAATGTTCCTCGGAACACTGTAAAAACCTAAAAGTTAAGGAAACTCAAACCATTTGTCACgttcaaagtaaacaaaaataaagatgaatccaggtgcaAGTGTGACCAAAGGTCCAACAAAACAGTCCAAAAAGGATAACAAACGACTCAAATGCAGTATTTGGACAGGAGTCAAAATAAATCCAAAAAACAGCAAAATGGCTCAGGATTATCTAATGAAACGGCAACGAGAATCCTGACAAGACACAGAGA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00041893 True 345 lncRNA 0.36 2 15099470 15101426

Neighbor


gene id symbol gene type direction distance location
XLOC_020292 NA coding upstream 33518 15058189 ~ 15065952 (+)
XLOC_020291 NA coding upstream 88782 14991684 ~ 15010688 (+)
XLOC_020290 NA coding upstream 218044 14879864 ~ 14881426 (+)
XLOC_020289 gtpbp1l coding upstream 245050 14836040 ~ 14854420 (+)
XLOC_020288 CU137716.1 coding upstream 605099 14489758 ~ 14494371 (+)
XLOC_020294 sult3st3 coding downstream 207100 15308526 ~ 15314114 (+)
XLOC_020295 sult3st3 coding downstream 214229 15315655 ~ 15318280 (+)
XLOC_020296 sult3st5 coding downstream 222504 15323930 ~ 15327809 (+)
XLOC_020297 sult3st4 coding downstream 229788 15331214 ~ 15336381 (+)
XLOC_020298 sult3st2 coding downstream 235326 15336752 ~ 15342165 (+)
XLOC_020287 NA non-coding upstream 797841 14300668 ~ 14301629 (+)
XLOC_020300 NA non-coding downstream 256733 15358159 ~ 15360184 (+)
XLOC_020306 BX323550.1 non-coding downstream 631541 15732967 ~ 15734843 (+)
XLOC_020308 BX323550.5 non-coding downstream 686555 15787981 ~ 15937268 (+)
XLOC_020313 CR751228.1 non-coding downstream 1176072 16277498 ~ 16277625 (+)
XLOC_020322 BX322568.1 non-coding downstream 1537884 16639310 ~ 16639425 (+)

Expression



Co-expression Network