Gene
RNA
| Item | Value |
|---|---|
| gene id | G80975 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 72204507 ~ 72264780 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU89468 | True | 219 | lncRNA | 0.29 | 2 | 72204507 | 72264780 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528822 | clm1 | coding | downstream | 10734 | 72176415 ~ 72193773 (-) |
| smap1 | LOC106576989 | coding | downstream | 100480 | 72041913 ~ 72104027 (-) |
| LOC110528682 | LOC106576986 | coding | downstream | 203247 | 71994810 ~ 72001260 (-) |
| LOC110528651 | LOC106607091 | coding | downstream | 242778 | 71896224 ~ 71961729 (-) |
| bcl11aa | bcl11a | coding | downstream | 332315 | 71824393 ~ 71872192 (-) |
| LOC118965494 | LOC106576993 | coding | upstream | 11918 | 72276698 ~ 72281244 (-) |
| LOC110528856 | gtpbp2 | coding | upstream | 65555 | 72330335 ~ 72355781 (-) |
| LOC110532653 | bfsp1 | coding | upstream | 244178 | 72508958 ~ 72525721 (-) |
| LOC110532660 | LOC107688027 | coding | upstream | 341955 | 72606735 ~ 72607622 (-) |
| plek | LOC106577000 | coding | upstream | 347406 | 72612186 ~ 72618218 (-) |
| LOC110528794 | LOC106576993 | non-coding | downstream | 53 | 72202814 ~ 72251918 (-) |
| G80934 | LOC106576990 | non-coding | downstream | 51614 | 72150787 ~ 72152893 (-) |
| G80915 | NA | non-coding | downstream | 79617 | 72124677 ~ 72124890 (-) |
| G80190 | NA | non-coding | downstream | 243189 | 71927506 ~ 71961318 (-) |
| G80148 | NA | non-coding | downstream | 362938 | 71841320 ~ 71841569 (-) |
| G81095 | NA | non-coding | upstream | 163215 | 72427995 ~ 72428306 (-) |
| G81119 | NA | non-coding | upstream | 188628 | 72453408 ~ 72458642 (-) |
| G81127 | NA | non-coding | upstream | 204064 | 72468844 ~ 72516167 (-) |
| G81120 | pcsk2 | non-coding | upstream | 219014 | 72483794 ~ 72508066 (-) |
| G81145 | NA | non-coding | upstream | 227947 | 72492727 ~ 72532701 (-) |
| G79904 | NA | other | downstream | 460698 | 71743045 ~ 71743809 (-) |
| G79700 | NA | other | downstream | 734048 | 71469435 ~ 71470755 (-) |
| G79616 | NA | other | downstream | 817984 | 71321950 ~ 71386523 (-) |
| G78414 | NA | other | downstream | 1848916 | 70354916 ~ 70355591 (-) |
| LOC118965321 | LOC106576963 | other | downstream | 2115793 | 70082835 ~ 70088715 (-) |
| G83429 | NA | other | upstream | 2307667 | 74572447 ~ 74572789 (-) |
| fank1 | fank1 | other | upstream | 2707432 | 74971772 ~ 74975108 (-) |
| G84713 | NA | other | upstream | 3263563 | 75528343 ~ 75528903 (-) |
| G85866 | NA | other | upstream | 4068688 | 76333468 ~ 76334136 (-) |
| ccser2a | ccser2 | other | upstream | 4102513 | 76324531 ~ 76399997 (-) |
