XLOC_020294 (sult3st3)


Basic Information

Item Value
gene id XLOC_020294
gene name sult3st3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 15308526 ~ 15314114 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040298
ttatttaaaacttctaAAATTACAATACGAATTTCATGGTTAACCAACGGTGAACCATTTTTTCTCAAAgtcaaaaacattttcataatcGAAAGAACCCGTTCCATGGTAAAGATCCTTTTGTTAAATGAAAAGGTTCTATAAAGGTTCTTGGAACCATTAATGCCAATGACAACCTTTATAGTATATTTAAAAGCATGTAATATTACAGAACATGTCTTCGGAACTTTACTActcaattttctttttaaatgtataactaTGAATAAAGACTTAACTTGATTTTCCAAGTTCAAAggttgtttataaataaataacactttgtGACAGTGAGCTCATTTCTCAGTGAAATCTGGCCCTATATATACTCAGTGGTTTACAGTCTTGCTGATTCTGGCTCAGAAAGAAATCAAACATGGCTCAGGAGGAATGCAAAATGCTAAGTgacaaactgttaaattacaaagGAACTGTCCTGACTGTGGATATCCGCCACGACATTACTCCAGAATATATTGACAGTTTACAGGATTTTGATGCAAGAGATGATGATGTCTTTGTTGTGGCCTTCCCAAAATCTGGATTTCCCGGAGAAAGCCAAACAAATCACATATAAGCAAATGCCCTGGATTGAGTATCAGGAAAAGGGAAAAGATTACAGCACACGTCCATCTCCATTCTCCAAGACTCTTCTGTTCACATTTACTGGAGCCGCTGATGCCCAGAGCTCTCCAGAAGAAAGGAAAAGTCATTTATGTCATGAGGAACCCCAAAGACGTCATGGTGTCGTATTTAGTAGGAGCTACGATGAGATGTTAAAGAAATTCATTACAGGATGCATGATTGGTGGCTCCTGGTTTGACCATGTTAAAGGATGGGTGACTAGTAAAGACAAATACAACATTCTGATCCTGACTTATGAAGAGATGATCAAGGACCTCAGATCCGTCATTGTGAAAATCTGTAAGTTTGTTGGCAAGAATCTGTCAGACGCAGCCATCGATAAAGTGGTGGAAAGAGCAACATTCAACCAAATGAAAGTAGACCCTGTGGCCAACTATGAGTCTGTTCCTTGGAAGATCACAGATCAGCCAAAAGGAGTTTTTTTGCGCAAAGGAACGGTTGGAGACTGGAGGAACTCTTTAACTGTGGCTCAGAGTGAATGTCTTGATCGTGCCTttgaagaaagaatgaaagaggTGCCTAACCTAGTCTGGGACATCGCACATTTTTGTGGCTGAAAACTCaagttgtaatttttattttggaacAAATGAAGATCTAAAACTATCATACTGGTACTatcatacaaaaatatataaatgcatatcaCAAACATATCATTGAGAGAAAACTGATAATTGCTCTAAATGAAATTCTCCCAATATATTATCAGTTTTCTCTCAATGATATGTTTGtgatatgcatttatatatttttgtatgatAGTAATTTTGTATAAATACAGAAATGGGAAATGAGTAtacgattctattttttttttttttttgagcaataAATAACTGACTACAAGGGACTTTTAGTTTGATAGGCGACTCACGCGCATGCGTAGTTCGTCCACATCCAAGTTTTTCATGCAAATATTCATACTCACTTGATGTTACACACTACGTTTTGAGGGTTTTTTCTTCTGCTTGTTGATGCAACTACATCTCTTCTATAATGAATATGGCACATTAAGatgttttattttgcaaaaaaaattatacatttttaaaaattgtaaaaatcttAGAACTGTTTGCTGGAGCCTCACTCTGAGTCTGAATAAATAGTCGTCTACTGGAGAGTCAAATGAATCAATTattatcaccattattattatggatcaacaataaattgtttacatgacatcagggctgcacaatatatcgtttcatcatcgatatcgcaatgtgcgtgtccgcaatagtcacatcataagatatgcaatgttgagctgTATAATAGATGACcagaaaccacaggtcaaaacacatgaGATCTGTGCTGAATTTAAGCTCAATATAGTGAAAGTTAattatctgcatgtgttttaagaTGTGACCATGTAAGCATTTAAAGAGagttcaaaacattttaatagaGCATAAAGAagtttattaaagattaatttaattaagtttatgcattGTTAAttaacatttgattattcaatttctacagaatactgttagactctccccAGAAAACTATGaatcactgtttattttacttaaatatttgctctgttttgtttatgactgtgttttgtttattatatgtacaGTTGTAGTTGTAGAGTTATTTGCCCCCTtagagttttctttattttctcaaatacttcccaaattatgtttaacagatcaaggacattttcacagtatgtctgatcattttttcttctggagaaagtcttatttgctttattttggctagaataagagcagtttttaattttttaaaaaccattttaatgtcaaaattattagcccttttaaactatattttttccaatagtctacagaacaaaccatcgttatacaataacttgcctaattaccctaacctgcctagttaacctaattaacctagttaagtctttaaatgtcactttaagctgtgcagaagtgtcctgaaaaatatcaggtaaaatattatttacagtcatcatgacaaagataaaataaatcagttattggaaatgagttattaaacctattatgtttagaaatttgttgaaaataaTCTTCTCCAAAAAAGATTCTATTAAATTACTAATATGTGCTTAAGTCCagtagtgaagtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacctaactgTTCTTATTAAAATACTATTCAGCATGGGATTATAGTATGTATTCATAATTAGATGTTACTTAATGATGGTAATACTTACTCATTAGATACAGTTACTTATTTATCATATACCAATAGGGCACTTTAAGTACTTCTTTTTCCGGCAATGGGTATATTAACTCTTGTTTTGTTATAGTTAGCTATAATGGATTTTGATAATAATCCATTAAGGCCCTGATGATTGTTTTGCAATTGAATGTATTTGTAATagctgcaacaacaaaaaaagaacaaagaaaGAAATAGAATAGTAACGAATTTAATGTTTGTAATGGGTAAACcaatgtaagtgttttttttttgtttatttatttttagcaaaaaTTCTGGTTTCTGACCTTTCTGatatttttgatagtcttcaGTTCCCCATAATAACCAGTAGATGTCAGCAAACACATTCAAGTCCAGATCATAAATCGAAATATTAGGATTTCAAGCGTGATTGTCAATTCCAAAATTTAGTTGAACTTGTCAAGCTGTTTAAGAGACCATcctgttttatttgtttacttgagGTGTATGTACTAGTTTGTGGATCAATCTCTTGTTCTACTATGATTGCTTTACTACATTCTTATCCACTTTCAAAACAGCAAACATGACTTTTATGTAGAGGTTATCCTGGCACAAAGCCTTAATCAACACTCCTGAACTGCCATTATCTCGTATTTAAGAAGAACTACGTGACATTGAAC
>TCONS_00040299
TCCATTCTCCAAGACTCTTCTGTTCACATTTACTGGAGCCGCTGATGCCCAGAGCTCTCCAGAAGAAAGGAAAAGTCATTTATGTCATGAGGAACCCCAAAGACGTCATGGTGTCGTATTTAGTAGGAGCTACGATGAGATTGATTGGTGGCTCCTGGTTTGACCATGTTAAAGGATGGGTGACTAGTAAAGACAAATACAACATTCTGATCCTGACTTATGAAGAGATGATCAAGGACCTCAGATCCGTCATTGTGAAAATCTGTAAGTTTGTTGGCAAGAATCTGTCAGACGCAGCCATCGATAAAGTGGTGGAAAGAGCAACATTCAACCAAATGAAAGTAGACCCTGTGGCCAACTATGAGTCTGTTCCTTGGAAGATCACAGATCAGCCAAAAGGAGTTTTTTTGCGCAAAGGAACGGTTGGAGACTGGAGGAACTCTTTAACTGTGGCTCAGAGTGAATGTCTTGATCGTGCCTttgaagaaagaatgaaagaggTGCCTAACCTAGTCTGGGACATCGCACATTTTTGTGGCTGAAAACTCaagttgtaatttttattttggaacAAATGAAGATCTAAAACTATCATACTGGTACTatcatacaaaaatatataaatgcatatcaCAAACATATCATTGAGAGAAAACTGATAATTGCTCTAAATGAAATTCTCCCAATAT

Function

symbol description
sult3st3 Enables sulfotransferase activity. Predicted to be involved in sulfation. Predicted to be active in cytoplasm. Is expressed in unfertilized egg.

GO:

id name namespace
GO:0008146 sulfotransferase activity molecular_function
GO:0016740 transferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-628 Enables sulfotransferase activity. Predicted to be involved in sulfation. Predicted to be active in cytoplasm. Is expressed in unfertilized egg.

Ensembl:

ensembl_id ENSDARG00000094089

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040298 False 3582 mRNA 0.32 6 15308526 15314114
TCONS_00040299 True 689 mRNA 0.40 5 15310103 15311920

Neighbor

gene id symbol gene type direction distance location
XLOC_020293 NA coding upstream 207100 15099470 ~ 15101426 (+)
XLOC_020292 NA coding upstream 242574 15058189 ~ 15065952 (+)
XLOC_020291 NA coding upstream 297838 14991684 ~ 15010688 (+)
XLOC_020290 NA coding upstream 427100 14879864 ~ 14881426 (+)
XLOC_020289 gtpbp1l coding upstream 454106 14836040 ~ 14854420 (+)
XLOC_020295 sult3st3 coding downstream 1541 15315655 ~ 15318280 (+)
XLOC_020296 sult3st5 coding downstream 9816 15323930 ~ 15327809 (+)
XLOC_020297 sult3st4 coding downstream 17100 15331214 ~ 15336381 (+)
XLOC_020298 sult3st2 coding downstream 22638 15336752 ~ 15342165 (+)
XLOC_020299 rrp36 coding downstream 29839 15343953 ~ 15352546 (+)
XLOC_020288 CU137716.1 non-coding upstream 814155 14489758 ~ 14494371 (+)
XLOC_020300 NA non-coding downstream 44045 15358159 ~ 15360184 (+)
XLOC_020306 BX323550.1 non-coding downstream 418853 15732967 ~ 15734843 (+)
XLOC_020308 BX323550.5 non-coding downstream 473867 15787981 ~ 15937268 (+)
XLOC_020313 CR751228.1 non-coding downstream 963384 16277498 ~ 16277625 (+)
XLOC_020322 BX322568.1 non-coding downstream 1325196 16639310 ~ 16639425 (+)

Expression


Co-expression Network