G81777


Basic Information

Item Value
gene id G81777
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 73382041 ~ 73382267 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU90308
gctatgggctgttcttatgcacgatgcaTTGCGTaatgcctggacacagcccttagctgtggtttATTGGCCATGTGTCataaacccccaaggtgccttattactattataaactggttacgaatgtaattagagcagcaaaaataaatattttgtcatacccgtggtatacgatctgatataccacagctgtcagtcaatcagcattcatggctcgaaccacccag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90308 True 227 lncRNA 0.41 1 73382041 73382267

Neighbor

gene id symbol gene type direction distance location
LOC110528891 LOC106577001 coding upstream 298205 72816192 ~ 73083836 (+)
LOC110528917 NA coding upstream 381810 72999236 ~ 73000231 (+)
prokr1b LOC106577087 coding upstream 820982 72545613 ~ 72561059 (+)
pcsk2 pcsk2 coding upstream 873908 72419949 ~ 72508133 (+)
LOC110528865 otor coding upstream 1010262 72370213 ~ 72371779 (+)
LOC110528965 LOC106577007 coding downstream 3761 73386028 ~ 73398995 (+)
LOC110528975 LOC106577008 coding downstream 18580 73400847 ~ 73418442 (+)
LOC110528986 LOC106577009 coding downstream 50786 73433053 ~ 73450455 (+)
LOC110529004 LOC106577010 coding downstream 96021 73478288 ~ 73485148 (+)
LOC110529026 LOC106577090 coding downstream 169351 73551618 ~ 73553748 (+)
G81775 NA non-coding upstream 1011 73380547 ~ 73381030 (+)
G81773 NA non-coding upstream 4975 73376857 ~ 73377066 (+)
G81601 NA non-coding upstream 240500 73140481 ~ 73141541 (+)
G81568 NA non-coding upstream 260562 73120443 ~ 73121479 (+)
G81566 NA non-coding upstream 262567 73119248 ~ 73119474 (+)
G81779 NA non-coding downstream 2544 73384811 ~ 73385121 (+)
G81734 NA non-coding downstream 17305 73399572 ~ 73400344 (+)
G81802 NA non-coding downstream 72080 73454347 ~ 73454736 (+)
G81804 NA non-coding downstream 73659 73455926 ~ 73456380 (+)
G81805 NA non-coding downstream 74194 73456461 ~ 73456677 (+)
ccdc85a ccdc85a other upstream 2305939 71036440 ~ 71076239 (+)
G78121 NA other upstream 2727080 70571665 ~ 70654961 (+)
G75747 NA other upstream 5007112 68374505 ~ 68374929 (+)
G74139 NA other upstream 6597072 66784335 ~ 66784969 (+)
G74067 LOC106576735 other upstream 6623057 66756207 ~ 66758984 (+)
G82111 LOC106577091 other downstream 169349 73551616 ~ 73571737 (+)
G83836 NA other downstream 1526958 74909225 ~ 74909806 (+)
G83829 NA other downstream 1730393 75112660 ~ 75114190 (+)
G83979 NA other downstream 1762597 75144864 ~ 75145512 (+)
LOC110529610 NA other downstream 3075857 76457821 ~ 76459823 (+)

Expression


Co-expression Network