XLOC_020297 (sult3st4)


Basic Information

Item Value
gene id XLOC_020297
gene name sult3st4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 15331214 ~ 15336381 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040302
GATAAGCTCTTTTCTTAATGAAATCTGGCCCTGGATATAACAGGCTGCACTCTGTGGTTTACAATCTTGCTGATTCTGCCTCAGAAAGAAACCAAACATGGCTCAGGAGGAATGCAAAATGATTAGTGACAAACTGTTGAAGTACAAAGAAACTGTGTTGACTCTGGAACCCAGCTACGACATTACTCCAGAATATATTGACAGTATACAGGATTTTGAAACAAGGGATGACGATGTATTTGTTGTTACCTTCCCCAAATCTGGTACAGTATGGACCCAGCGGATCATAACTTTAATTTATGAGGAGGATTTCCCGGAGAAAGCCAAACAAATCACATTCGAGCAAATGCCCTGGATTGAGTATCGGAAAAAGGGGAAAGATTACAGCACACGTCCATCTCCAAGACTCTTCTGTTCGCATCTACTGGAGCCGTTGATGCCCAAAACTCTCAAAAGGAAAGGAAAAGTCATCTACGTCATGAGGAACCCCAAAGATGTCATGgtttcatattttcatttttctaaaaaaatgaaaaatctggaTTCTGCCAAGAGCTACGACGAGGTCTTAGAGAATTTCTTAACAGGATGCATGGTTGGTGGCTCCTGGTTTGACCATGTTAAAGGATGGGTGACAAGTAAAGACAAATACAACATCCTGATCCTGACTTATGAAGAGATGATCAAGGACCTCAGATCCGTCATTGTGAAAATCTGTGAGTTTGTTGGCAAGAATCTGTCAGACGCAGCCATCGATAAAGTGGTGGAAAGAGCAACATTCAAGCAAATGAAAGTAGACCCTGTGGCCAACTATGAGTCCCTTCCTGTGGATATCACAGATCAGCCGAAAGGAGCTTTTATGCGCAAAGgAACGGTTGGAGACTGGAGGAACTCTTTAACCATGGCTCAGAGTGAATGTGTTGATGGTGCCCttgaagaaagaatgaaagacGTGCCTCTTAACCTGGTCTGGGACATCACAGAACTGCGTGGCTGAAAACTTAAGttgtgacttttatttttaaacaaataaagatataaaacTATCATACTGGTAAAAGGAATGCTTATCATAAAGAGAAAACTGATAATTTGCTCTAAATGAAATGTCTCCCAATTTTATGGATTTTATGTTTATAATGAGATAACCAATAATTTTTTGTATGGTTTTTTTCATTGGTTGAAATACTAGGTTCTGACTTCTCTGTAATATTTCCGACATTCTTTGGGTTTTTCAGAATAACCAGTAGATGTCAGTAAACAAATTCAAGTTCAGGTCACAGACATAAATGTTATGATTTCAAACGTGAATGTCAAACCCAAAATTTAAATTAACTTCCCCACAAGTTGTTTAAGACACcatcttgttttatttgttttggtaatGTACTAGTTGGTGAATCGAAGTAAAGGGttagtaaatttaaatatttgggtGAATGTTTCCTTTAAATTAGGCTGAAACAATCCCATTTAAAGATACAGGACATAGATGAATCATATGAAACATTTTCTACTGAGCCTGTCATGATATTTCATTTGTCAGTATATCTAGAACAGATGTTGTCAATTGAAGGACCTAGTCAGCTTCCAGGAGTGCCACAGAATGACTTTAAAGTGTTTGATAAAttacaatttgtaaaatattaaaaataaaactagtctcaaataaaatgttacaaaacaaacCTTAAAGTGTCTAAGTGATCTAAATGTTACCATGTGTTCCCCAAAAGCATTGTAAGTCTATCAGAAAAATGATCATacgactaataataataattatatggcAGACTTAAAAGATCCAAAGCACAGcagcaagtccacttctgaatAGCTGAAGAAAGACAATATTATAATTTGGGATgacctagtcaaagtcctgacctcaattcaattgagatgctgtggcatgacctgaAAAAGGCGGTTCATTTTCTAAAATCCTCTAACGTGGCTAAAATACAACTTTTCTGCAAAGATAAACAGGCCAAAATCTTCCCACAGCGCTGTAACAGTCTCATTGCAAGTTATCCAAAATGCTTGATTTTATTTGTTGCTATAAGAATGGCCCAACCAGGTATTAGGTTTAGGGGCAAACACTTGTTCACAATGGCGCTTTgggattattatttttgtttttaacaataaaaaaccttca

Function

symbol description
sult3st4 Enables sulfotransferase activity. Acts upstream of or within sulfation. Predicted to be active in cytoplasm. Is expressed in spinal cord.

GO:

id name namespace
GO:0051923 sulfation biological_process
GO:0005575 cellular_component cellular_component
GO:0008146 sulfotransferase activity molecular_function
GO:0016740 transferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050913-17 Enables sulfotransferase activity. Acts upstream of or within sulfation. Predicted to be active in cytoplasm. Is expressed in spinal cord.

Ensembl:

ensembl_id ENSDARG00000040781

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040302 True 2161 mRNA 0.37 6 15331214 15336381

Neighbor

gene id symbol gene type direction distance location
XLOC_020296 sult3st5 coding upstream 3405 15323930 ~ 15327809 (+)
XLOC_020295 sult3st3 coding upstream 12934 15315655 ~ 15318280 (+)
XLOC_020294 sult3st3 coding upstream 17100 15308526 ~ 15314114 (+)
XLOC_020293 NA coding upstream 229788 15099470 ~ 15101426 (+)
XLOC_020292 NA coding upstream 265262 15058189 ~ 15065952 (+)
XLOC_020298 sult3st2 coding downstream 371 15336752 ~ 15342165 (+)
XLOC_020299 rrp36 coding downstream 7572 15343953 ~ 15352546 (+)
XLOC_020300 NA coding downstream 21778 15358159 ~ 15360184 (+)
XLOC_020301 gpc5b coding downstream 102132 15438513 ~ 15501417 (+)
XLOC_020302 gpc1a coding downstream 170837 15507218 ~ 15548201 (+)
XLOC_020291 NA non-coding upstream 320526 14991684 ~ 15010688 (+)
XLOC_020290 NA non-coding upstream 449788 14879864 ~ 14881426 (+)
XLOC_020288 CU137716.1 non-coding upstream 836843 14489758 ~ 14494371 (+)
XLOC_020306 BX323550.1 non-coding downstream 396586 15732967 ~ 15734843 (+)
XLOC_020308 BX323550.5 non-coding downstream 451600 15787981 ~ 15937268 (+)
XLOC_020313 CR751228.1 non-coding downstream 941117 16277498 ~ 16277625 (+)
XLOC_020322 BX322568.1 non-coding downstream 1302929 16639310 ~ 16639425 (+)

Expression


Co-expression Network