Gene
RNA
| Item | Value |
|---|---|
| gene id | G82213 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 73621338 ~ 73621803 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: piggyBac transposable element-derived protein 4-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU90784 | True | 339 | lncRNA | 0.36 | 2 | 73621338 | 73621803 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529015 | LOC106577089 | coding | downstream | 72385 | 73547098 ~ 73548953 (-) |
| LOC110528949 | LOC106577006 | coding | downstream | 247601 | 73323452 ~ 73373737 (-) |
| LOC110528926 | LOC106577002 | coding | downstream | 331228 | 73140464 ~ 73290110 (-) |
| LOC110528940 | LOC106577088 | coding | downstream | 484488 | 73134648 ~ 73136850 (-) |
| plek | LOC106577000 | coding | downstream | 1003120 | 72612186 ~ 72618218 (-) |
| sfr1 | sfr1 | coding | upstream | 15832 | 73637635 ~ 73639525 (-) |
| slka | slk | coding | upstream | 53855 | 73675658 ~ 73711294 (-) |
| LOC110529113 | neurl1 | coding | upstream | 204621 | 73826424 ~ 73886957 (-) |
| LOC110529136 | LOC106608714 | coding | upstream | 390188 | 74011991 ~ 74062308 (-) |
| LOC110529148 | NA | coding | upstream | 461136 | 74081285 ~ 74085971 (-) |
| G82165 | LOC106577091 | non-coding | downstream | 11238 | 73551798 ~ 73610100 (-) |
| G82176 | NA | non-coding | downstream | 14626 | 73564828 ~ 73606712 (-) |
| G82039 | NA | non-coding | downstream | 132235 | 73482607 ~ 73489103 (-) |
| G82038 | NA | non-coding | downstream | 134452 | 73459791 ~ 73486886 (-) |
| G82217 | cfap43 | non-coding | upstream | 4555 | 73626358 ~ 73626719 (-) |
| G82234 | NA | non-coding | upstream | 23713 | 73645516 ~ 73645939 (-) |
| G82605 | NA | non-coding | upstream | 50281 | 73672084 ~ 73674931 (-) |
| G82608 | NA | non-coding | upstream | 53284 | 73675087 ~ 73675418 (-) |
| G82654 | NA | non-coding | upstream | 118384 | 73740187 ~ 73772122 (-) |
| LOC110528794 | LOC106576993 | other | downstream | 1369420 | 72202814 ~ 72251918 (-) |
| G80957 | NA | other | downstream | 1410249 | 72207929 ~ 72211089 (-) |
| G79904 | NA | other | downstream | 1877529 | 71743045 ~ 71743809 (-) |
| G79700 | NA | other | downstream | 2150879 | 71469435 ~ 71470755 (-) |
| G79616 | NA | other | downstream | 2234815 | 71321950 ~ 71386523 (-) |
| G83429 | NA | other | upstream | 950644 | 74572447 ~ 74572789 (-) |
| fank1 | fank1 | other | upstream | 1350409 | 74971772 ~ 74975108 (-) |
| G84713 | NA | other | upstream | 1906540 | 75528343 ~ 75528903 (-) |
| G85866 | NA | other | upstream | 2711665 | 76333468 ~ 76334136 (-) |
| ccser2a | ccser2 | other | upstream | 2745490 | 76324531 ~ 76399997 (-) |
