G82605


Basic Information

Item Value
gene id G82605
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 73672084 ~ 73674931 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU91202
tgctgataatggacctctgtacgcctatgtagataggtttcctgctacaatagtaatttacaacattaacaatgtctacactgtatttctgatcaatttgatgttattttaaaggacagaaaatgtgcttttcttgaaaaaacatggacatttctaagtgaccccaaacttttgaacagtagtgtacatatGCAAGAGCACACACTtaagtacacacacacacacacacacacacacacacagcagtgtcAGCTGTCATATAGAGGGATGCAATCACAACACTTTCCTTTTCAAGACTTTATTTTCTCCTTCTTCCCCCTTACAATTTCACCCTTCTCAGCTCCAAGGAAAATGTTGTCAAAAGTGACAATTGCACTTTTCTGAGCACGGTTATGTTCTACCACTTTTAAAATAGCTCAGGCAAATTTCAAACCAATTGCAAGTACCAAGTTTATAAAGAACCCAGTGCCTAAATGAATTGACATAATGATCGTGCTTTTCTCCAGACTTGCTCTCTTACCTGCAGCCCAGTGCTCCCCTGAGGCCTTTTGCACTAAAATGGCTGGAAATTTGTACAAACCATGAAATACCATCAAACTTGTATTTTTTAGTGATCCATATAAGCTGGTGGTTGAGTTCATTCTAAGGTCGTTGATTGATGGATATCTGTTAACAAATAAAAGTCATTTTTTGGTAAATCGTGAAGTGCTCATTCACGTGATGTACTATGTATGGAGTTGTGATTTATTTTAGATACTGTGCTGttgaatcaatcaaatcaaactgtcctGTATATTAGAACAAATGTTCCCACTTTCTCCCTATTGTAATCAGTAGATAGTTTTTGTTAGACTTCTGGGTTGTCATCATGTCAGTCACCTTTCCTGTTAAAAATCGACACAGCTTATTGTCTTTTGGTTATACTTTGAACACATTATTTTGGATGTGGCAGACATACATATTATTACGCTGAAAGGAATGTAAGCCGCTGGTCAtaatttttcactgttttatgtgAACTGAGAATATGCAGTAATGGACTGTTATGTatgtacagtgagctccaaaagtattgggacagtgacacatttttattttttgctctgtactccagcactttggattttaaatgatacTTTAACCTTATAGTCATTGTACTCTGTATTTGAAACGATACAGAGCTAAAACGACAAAAcgtgtgtcactgtcccaatacttttggagctcactgtgtcTTACAGTCAGTAAAAAAACGAGGGTCCACTTGGATTAGTTCTATTTTCAAATGACTTTTTGCCGCCTCTACCCAAATctattttattttcaaatgaaCTGAATCATTCAAAGCTGTGGCGCCTTGCATTTTGTTCTGTATTTATACTTTTATTTTCAATTTGAAATATGTCCTTACTATTTTactgggttggggtcaattctaaTTTAATTTAAAATTCCAATAAATAGTTTGAATTCACTCATGAAGTGGAGAATTTAATTCAATTCTCATTTTTAAAAAGTCTTCAAGCTATGGAATTGAACTGGAATTAGATTGTTTGGACTTTTTGAATTGGAATTGTAAAAACCAGTTAATAAAGTGAATGCACATATAGCATCAAACATTGACtgtatgatttgatttgaatcattTCAActtgtatttctatatttcaggtatagctaggctgtctgaacagtgaTATGGTCAGCCTCAAAGCCTGAGGGAACTGAATTAGAGTTGGAATTTGTTGAATTGTTGTGATAATATTGAGTTGAATGGAATTATCTCTGAAATTAAAGATTGATCCGGAActtgaatttaatttaaatggGATTTACAGGGAGAGCGATTTGAATTGAATTTCTGGAATTGATCTCATCCCTGCTATTTTATGATGACCAGTTTTCTAAATATGTATACATGTTGTATCAATGTACATCTCAATATAGTCTTTGGACATCGTTTTTGGATGGACAATATGATATCTGTAAATGGAAGTCATTATACTGTCCTAATTAGTTGATTCAAATAagaatgtatgtactgtatgtattaatAATATGGACAAAGTACTGACCCCTTCAAGTGAGTCCCCTTGACATGATGGCAAGCGCTCTATAAcaaacatattcttatagcatgTCATGGTTTGTGTATGACGTCCTAATAAAAAACATAGATGGCATGCAAAGGGTGAATGCTGTTATTTTATTACAATGACATCACGTCTTGAATTCTGGATTTGTATTGGGATTGTGGGTAATATTACCCGTAATGCACATTAGGTTCAGGCCATAGCGCTAGATGGGGGTTTCATCTTTGTATCTGGACCattatagcatctgtgacagcatgggcagtgccattgaggcaatctccattttgaagtagtcaattttcttctttgcgattggctgatccctcctgatgacccggGTTAGACATGACTCGAACAAGGCCACCAAGAGGGTTCagccacccagttgactacattaaaatggtggaagccctcaatggcgctgcaCATGCTAATACAGCATTTTGACCACTAGAGGACTCTGTAATTCTATATGGTTCAGGCATTATCATATTTCTATTTTctttgttactttttttttttttcaaataccTACAGGCACAAAACTATTGCAAGTAATTGGATATTGAAAATCAACAGGGGTTGATTTAAAATATAACACGTCATGAGCCTATTGTTGTTGCATTTAGCTATAATGTGGGACATCTTATCATCCTGAACAAACATATGCATTTTTGAGGTCAGGTAAAGTGTATATAAGATGTTTGTTAATGGACATTTGT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU91202 True 2818 lncRNA 0.35 2 73672084 73674931

Neighbor

gene id symbol gene type direction distance location
sfr1 sfr1 coding downstream 32559 73637635 ~ 73639525 (-)
LOC110529015 LOC106577089 coding downstream 123131 73547098 ~ 73548953 (-)
LOC110528949 LOC106577006 coding downstream 298347 73323452 ~ 73373737 (-)
LOC110528926 LOC106577002 coding downstream 381974 73140464 ~ 73290110 (-)
LOC110528940 LOC106577088 coding downstream 535234 73134648 ~ 73136850 (-)
slka slk coding upstream 727 73675658 ~ 73711294 (-)
LOC110529113 neurl1 coding upstream 151493 73826424 ~ 73886957 (-)
LOC110529136 LOC106608714 coding upstream 337060 74011991 ~ 74062308 (-)
LOC110529148 NA coding upstream 408008 74081285 ~ 74085971 (-)
smndc1 spf30 coding upstream 508882 74183813 ~ 74189681 (-)
G82234 NA non-coding downstream 26145 73645516 ~ 73645939 (-)
G82217 cfap43 non-coding downstream 45365 73626358 ~ 73626719 (-)
G82213 NA non-coding downstream 50281 73621338 ~ 73621803 (-)
G82165 LOC106577091 non-coding downstream 61984 73551798 ~ 73610100 (-)
G82176 NA non-coding downstream 65372 73564828 ~ 73606712 (-)
G82608 NA non-coding upstream 156 73675087 ~ 73675418 (-)
G82654 NA non-coding upstream 65256 73740187 ~ 73772122 (-)
G82834 NA non-coding upstream 322506 73997437 ~ 73998413 (-)
G82931 NA non-coding upstream 492354 74167285 ~ 74167528 (-)
LOC110528794 LOC106576993 other downstream 1420166 72202814 ~ 72251918 (-)
G80957 NA other downstream 1460995 72207929 ~ 72211089 (-)
G79904 NA other downstream 1928275 71743045 ~ 71743809 (-)
G79700 NA other downstream 2201625 71469435 ~ 71470755 (-)
G79616 NA other downstream 2285561 71321950 ~ 71386523 (-)
G83429 NA other upstream 897516 74572447 ~ 74572789 (-)
fank1 fank1 other upstream 1297281 74971772 ~ 74975108 (-)
G84713 NA other upstream 1853412 75528343 ~ 75528903 (-)
G85866 NA other upstream 2658537 76333468 ~ 76334136 (-)
ccser2a ccser2 other upstream 2692362 76324531 ~ 76399997 (-)

Expression


Co-expression Network