Gene
RNA
| Item | Value |
|---|---|
| gene id | G82834 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 73997437 ~ 73998413 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| VPS10 domain-containing receptor SorCS3-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU91442 | True | 698 | lncRNA | 0.33 | 2 | 73997437 | 73998413 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529113 | neurl1 | coding | downstream | 110480 | 73826424 ~ 73886957 (-) |
| slka | slk | coding | downstream | 286143 | 73675658 ~ 73711294 (-) |
| sfr1 | sfr1 | coding | downstream | 357912 | 73637635 ~ 73639525 (-) |
| LOC110529015 | LOC106577089 | coding | downstream | 448484 | 73547098 ~ 73548953 (-) |
| LOC110528949 | LOC106577006 | coding | downstream | 623700 | 73323452 ~ 73373737 (-) |
| LOC110529136 | LOC106608714 | coding | upstream | 13578 | 74011991 ~ 74062308 (-) |
| LOC110529148 | NA | coding | upstream | 84526 | 74081285 ~ 74085971 (-) |
| smndc1 | spf30 | coding | upstream | 185400 | 74183813 ~ 74189681 (-) |
| LOC110529206 | ppp2r2d | coding | upstream | 230835 | 74229248 ~ 74234117 (-) |
| mgmt | mgmt | coding | upstream | 350377 | 74348790 ~ 74378154 (-) |
| G82654 | NA | non-coding | downstream | 225315 | 73740187 ~ 73772122 (-) |
| G82608 | NA | non-coding | downstream | 322019 | 73675087 ~ 73675418 (-) |
| G82605 | NA | non-coding | downstream | 322506 | 73672084 ~ 73674931 (-) |
| G82234 | NA | non-coding | downstream | 351498 | 73645516 ~ 73645939 (-) |
| G82217 | cfap43 | non-coding | downstream | 370718 | 73626358 ~ 73626719 (-) |
| G82931 | NA | non-coding | upstream | 168872 | 74167285 ~ 74167528 (-) |
| G82951 | NA | non-coding | upstream | 198974 | 74197387 ~ 74197605 (-) |
| G82958 | NA | non-coding | upstream | 207894 | 74206307 ~ 74207126 (-) |
| G82963 | NA | non-coding | upstream | 215457 | 74213870 ~ 74214184 (-) |
| LOC110528794 | LOC106576993 | other | downstream | 1745519 | 72202814 ~ 72251918 (-) |
| G80957 | NA | other | downstream | 1786348 | 72207929 ~ 72211089 (-) |
| G79904 | NA | other | downstream | 2253628 | 71743045 ~ 71743809 (-) |
| G79700 | NA | other | downstream | 2526978 | 71469435 ~ 71470755 (-) |
| G79616 | NA | other | downstream | 2610914 | 71321950 ~ 71386523 (-) |
| G83429 | NA | other | upstream | 574034 | 74572447 ~ 74572789 (-) |
| fank1 | fank1 | other | upstream | 973799 | 74971772 ~ 74975108 (-) |
| G84713 | NA | other | upstream | 1529930 | 75528343 ~ 75528903 (-) |
| G85866 | NA | other | upstream | 2335055 | 76333468 ~ 76334136 (-) |
| ccser2a | ccser2 | other | upstream | 2368880 | 76324531 ~ 76399997 (-) |
