G82564


Basic Information

Item Value
gene id G82564
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 74167938 ~ 74168176 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU91157
gattggactccaggttagttgactcctgactccaattagcttttggaaaagtcattagcttaggggttcacatactttttccaacctacactgtgaatgtttaaatgatgtattcaatatagacaagaaaaatacaatcatttgtgtgcTATTAGTTTAAGAACACTGTGTTTGTCTTTTGTTGTGACTAGgatgaagatcagatctaatttcatgactaatttatgcagaaaaacagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91157 True 239 lncRNA 0.34 1 74167938 74168176

Neighbor

gene id symbol gene type direction distance location
LOC110529161 add3 coding upstream 7667 74111112 ~ 74160271 (+)
LOC110529121 LOC106577020 coding upstream 159834 73952690 ~ 74008104 (+)
LOC118964464 NA coding upstream 224364 73943018 ~ 73943574 (+)
LOC110529112 sh3pxd2a coding upstream 357383 73715221 ~ 73810555 (+)
col17a1b col17a1 coding upstream 495631 73647943 ~ 73674938 (+)
LOC110529185 mxi1 coding downstream 3557 74171733 ~ 74183699 (+)
LOC110529196 LOC106577022 coding downstream 21884 74190060 ~ 74192420 (+)
bnip3 bnip3 coding downstream 50794 74218970 ~ 74226765 (+)
ebf3a LOC106577027 coding downstream 100504 74268680 ~ 74342595 (+)
LOC118966714 NA coding downstream 488380 74656556 ~ 74656864 (+)
G82241 NA non-coding upstream 492542 73675092 ~ 73675396 (+)
G82105 NA non-coding upstream 621663 73546001 ~ 73546275 (+)
G82064 NA non-coding upstream 667989 73499646 ~ 73499949 (+)
G81807 NA non-coding upstream 709450 73458175 ~ 73458488 (+)
G82568 spf30 non-coding downstream 17412 74185588 ~ 74189683 (+)
G82575 NA non-coding downstream 25242 74193418 ~ 74193623 (+)
G82535 NA non-coding downstream 59727 74227903 ~ 74229003 (+)
G82975 NA non-coding downstream 68061 74236237 ~ 74236439 (+)
G82981 NA non-coding downstream 71284 74239460 ~ 74239703 (+)
G82111 LOC106577091 other upstream 596201 73551616 ~ 73571737 (+)
ccdc85a ccdc85a other upstream 3091836 71036440 ~ 71076239 (+)
G78121 NA other upstream 3512977 70571665 ~ 70654961 (+)
G75747 NA other upstream 5793009 68374505 ~ 68374929 (+)
G74139 NA other upstream 7382969 66784335 ~ 66784969 (+)
G83836 NA other downstream 741049 74909225 ~ 74909806 (+)
G83829 NA other downstream 944484 75112660 ~ 75114190 (+)
G83979 NA other downstream 976688 75144864 ~ 75145512 (+)
LOC110529610 NA other downstream 2289948 76457821 ~ 76459823 (+)
G86019 NA other downstream 2463569 76631745 ~ 76635936 (+)

Expression


Co-expression Network