Gene
RNA
| Item | Value |
|---|---|
| gene id | G83143 |
| gene name | LOC106577027 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 74312503 ~ 74314710 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: transcription factor COE3-like isoform X8 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU91770 | True | 322 | lncRNA | 0.48 | 2 | 74312503 | 74314710 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529206 | ppp2r2d | coding | downstream | 78386 | 74229248 ~ 74234117 (-) |
| smndc1 | spf30 | coding | downstream | 122822 | 74183813 ~ 74189681 (-) |
| LOC110529148 | NA | coding | downstream | 226532 | 74081285 ~ 74085971 (-) |
| LOC110529136 | LOC106608714 | coding | downstream | 250195 | 74011991 ~ 74062308 (-) |
| LOC110529113 | neurl1 | coding | downstream | 425546 | 73826424 ~ 73886957 (-) |
| mgmt | mgmt | coding | upstream | 34080 | 74348790 ~ 74378154 (-) |
| gnrh3 | NA | coding | upstream | 162461 | 74477119 ~ 74478278 (-) |
| LOC110529277 | ptpre | coding | upstream | 165228 | 74479938 ~ 74531625 (-) |
| LOC110529307 | LOC106577031 | coding | upstream | 394620 | 74709330 ~ 74728846 (-) |
| fank1 | fank1 | coding | upstream | 657062 | 74971772 ~ 74975108 (-) |
| G83134 | NA | non-coding | downstream | 14769 | 74297030 ~ 74297734 (-) |
| G83111 | NA | non-coding | downstream | 54547 | 74257718 ~ 74257956 (-) |
| G83008 | NA | non-coding | downstream | 58084 | 74254169 ~ 74254419 (-) |
| G82987 | NA | non-coding | downstream | 69358 | 74242935 ~ 74243145 (-) |
| G82984 | NA | non-coding | downstream | 70941 | 74241358 ~ 74241562 (-) |
| G83172 | NA | non-coding | upstream | 35583 | 74350293 ~ 74350503 (-) |
| G83165 | NA | non-coding | upstream | 41593 | 74356303 ~ 74356819 (-) |
| G83163 | NA | non-coding | upstream | 43441 | 74358151 ~ 74358681 (-) |
| G83197 | NA | non-coding | upstream | 76303 | 74391013 ~ 74391300 (-) |
| G83217 | NA | non-coding | upstream | 100939 | 74415649 ~ 74415881 (-) |
| LOC110528794 | LOC106576993 | other | downstream | 2060585 | 72202814 ~ 72251918 (-) |
| G80957 | NA | other | downstream | 2101414 | 72207929 ~ 72211089 (-) |
| G79904 | NA | other | downstream | 2568694 | 71743045 ~ 71743809 (-) |
| G79700 | NA | other | downstream | 2842044 | 71469435 ~ 71470755 (-) |
| G79616 | NA | other | downstream | 2925980 | 71321950 ~ 71386523 (-) |
| G83429 | NA | other | upstream | 257737 | 74572447 ~ 74572789 (-) |
| G84713 | NA | other | upstream | 1213633 | 75528343 ~ 75528903 (-) |
| G85866 | NA | other | upstream | 2018758 | 76333468 ~ 76334136 (-) |
| ccser2a | ccser2 | other | upstream | 2052583 | 76324531 ~ 76399997 (-) |
