G83218



Basic Information


Item Value
gene id G83218
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 74416239 ~ 74416460 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU91847
gttacagaTATAAGGttatacctggtaggttccttgttaatttgtgtgagattgagggcacctATCTTAGATTGTatgactgccggggtgttaaacaaatcccagtttaggtcaccaaacagtacgaactctgaagatagatgggggggcaatcaattcacatatggtgtccagggcacagctggggctgAAAAGGGTCTATAACAACTGTTTCTGGAAAGg

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU91847 True 222 lncRNA 0.44 1 74416239 74416460

Neighbor


gene id symbol gene type direction distance location
mgmt mgmt coding downstream 38085 74348790 ~ 74378154 (-)
LOC110529206 ppp2r2d coding downstream 182122 74229248 ~ 74234117 (-)
smndc1 spf30 coding downstream 226558 74183813 ~ 74189681 (-)
LOC110529148 NA coding downstream 330268 74081285 ~ 74085971 (-)
LOC110529136 LOC106608714 coding downstream 353931 74011991 ~ 74062308 (-)
gnrh3 NA coding upstream 60711 74477119 ~ 74478278 (-)
LOC110529277 ptpre coding upstream 63478 74479938 ~ 74531625 (-)
LOC110529307 LOC106577031 coding upstream 292870 74709330 ~ 74728846 (-)
fank1 fank1 coding upstream 555312 74971772 ~ 74975108 (-)
edrf1 LOC106577037 coding upstream 565796 74982256 ~ 74996768 (-)
G83217 NA non-coding downstream 358 74415649 ~ 74415881 (-)
G83197 NA non-coding downstream 24939 74391013 ~ 74391300 (-)
G83163 NA non-coding downstream 57558 74358151 ~ 74358681 (-)
G83165 NA non-coding downstream 59420 74356303 ~ 74356819 (-)
G83172 NA non-coding downstream 65736 74350293 ~ 74350503 (-)
G83278 NA non-coding upstream 47353 74463813 ~ 74464105 (-)
G83288 NA non-coding upstream 55526 74471986 ~ 74472260 (-)
G83336 NA non-coding upstream 66043 74482503 ~ 74482803 (-)
LOC110528794 LOC106576993 other downstream 2164321 72202814 ~ 72251918 (-)
G80957 NA other downstream 2205150 72207929 ~ 72211089 (-)
G79904 NA other downstream 2672430 71743045 ~ 71743809 (-)
G79700 NA other downstream 2945780 71469435 ~ 71470755 (-)
G79616 NA other downstream 3029716 71321950 ~ 71386523 (-)
G83429 NA other upstream 155987 74572447 ~ 74572789 (-)
G84713 NA other upstream 1111883 75528343 ~ 75528903 (-)
G85866 NA other upstream 1917008 76333468 ~ 76334136 (-)
ccser2a ccser2 other upstream 1950833 76324531 ~ 76399997 (-)

Expression



Co-expression Network