G83376


Basic Information

Item Value
gene id G83376
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 74541661 ~ 74541918 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU92007
CTCTTTagaaagaccagagtgaacactttgtctgagattgctggtgttgtgaaggacagcactgtgacGGGGTCAATATCCCACAGCTAGTTGGACTGGAGGATGGcacggtgctggtggaaagctatggctgtcaacaacacctgactccgtacttcaggccgctgccacagatcaagcagtaccagcacttcaggtaaaaaaagtattttcattgtatgaggttattcttatctaaacttgggaggtgaattgatg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106561205

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92007 True 258 lncRNA 0.47 1 74541661 74541918

Neighbor

gene id symbol gene type direction distance location
ebf3a LOC106577027 coding upstream 199066 74268680 ~ 74342595 (+)
bnip3 bnip3 coding upstream 314896 74218970 ~ 74226765 (+)
LOC110529196 LOC106577022 coding upstream 349241 74190060 ~ 74192420 (+)
LOC110529185 mxi1 coding upstream 357962 74171733 ~ 74183699 (+)
LOC110529161 add3 coding upstream 381390 74111112 ~ 74160271 (+)
LOC118966714 NA coding downstream 114638 74656556 ~ 74656864 (+)
insyn2a fam196a coding downstream 140116 74682034 ~ 74709286 (+)
c1h10orf90 cssa18h10orf90 coding downstream 250638 74792556 ~ 74812476 (+)
LOC110529328 adam12 coding downstream 275789 74817707 ~ 74965855 (+)
LOC110529343 LOC106577035 coding downstream 433317 74975235 ~ 74981532 (+)
G83311 NA non-coding upstream 38601 74502860 ~ 74503060 (+)
G83308 NA non-coding upstream 42020 74499413 ~ 74499641 (+)
G83306 NA non-coding upstream 43379 74498049 ~ 74498282 (+)
G83303 NA non-coding upstream 50604 74490419 ~ 74491057 (+)
G83302 NA non-coding upstream 53336 74487951 ~ 74488325 (+)
G83388 NA non-coding downstream 6448 74548366 ~ 74548625 (+)
G83393 NA non-coding downstream 7793 74549711 ~ 74549924 (+)
G83405 NA non-coding downstream 14147 74556065 ~ 74556422 (+)
G83436 NA non-coding downstream 34851 74576769 ~ 74577227 (+)
G83471 NA non-coding downstream 58018 74599936 ~ 74600166 (+)
G82111 LOC106577091 other upstream 969924 73551616 ~ 73571737 (+)
ccdc85a ccdc85a other upstream 3465559 71036440 ~ 71076239 (+)
G78121 NA other upstream 3886700 70571665 ~ 70654961 (+)
G75747 NA other upstream 6166732 68374505 ~ 68374929 (+)
G74139 NA other upstream 7756692 66784335 ~ 66784969 (+)
G83836 NA other downstream 367307 74909225 ~ 74909806 (+)
G83829 NA other downstream 570742 75112660 ~ 75114190 (+)
G83979 NA other downstream 602946 75144864 ~ 75145512 (+)
LOC110529610 NA other downstream 1916206 76457821 ~ 76459823 (+)
G86019 NA other downstream 2089827 76631745 ~ 76635936 (+)

Expression


Co-expression Network