G83388


Basic Information

Item Value
gene id G83388
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 74548366 ~ 74548625 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU92019
GTCATCACAGTGACACAGCACTTTGGCTCTGTGGAAATATCACTACAGTAGAGAAAGATATGGTCTAGAAAGGGATTGAGATGCAATGGAGTACATCCACTCCCCTAAGGGCCCAGGAGACCTTTTAAGAGGgacatacattaccagtcaaaggtttggacacacctactcattcaggggtttgtctttatttttactattttcttcattgtagaataatagtgaagacatcaaaactatgaaataacacatagtaagtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92019 True 260 lncRNA 0.49 1 74548366 74548625

Neighbor

gene id symbol gene type direction distance location
ebf3a LOC106577027 coding upstream 205771 74268680 ~ 74342595 (+)
bnip3 bnip3 coding upstream 321601 74218970 ~ 74226765 (+)
LOC110529196 LOC106577022 coding upstream 355946 74190060 ~ 74192420 (+)
LOC110529185 mxi1 coding upstream 364667 74171733 ~ 74183699 (+)
LOC110529161 add3 coding upstream 388095 74111112 ~ 74160271 (+)
LOC118966714 NA coding downstream 107931 74656556 ~ 74656864 (+)
insyn2a fam196a coding downstream 133409 74682034 ~ 74709286 (+)
c1h10orf90 cssa18h10orf90 coding downstream 243931 74792556 ~ 74812476 (+)
LOC110529328 adam12 coding downstream 269082 74817707 ~ 74965855 (+)
LOC110529343 LOC106577035 coding downstream 426610 74975235 ~ 74981532 (+)
G83376 NA non-coding upstream 6448 74541661 ~ 74541918 (+)
G83311 NA non-coding upstream 45306 74502860 ~ 74503060 (+)
G83308 NA non-coding upstream 48725 74499413 ~ 74499641 (+)
G83306 NA non-coding upstream 50084 74498049 ~ 74498282 (+)
G83303 NA non-coding upstream 57309 74490419 ~ 74491057 (+)
G83393 NA non-coding downstream 1086 74549711 ~ 74549924 (+)
G83405 NA non-coding downstream 7440 74556065 ~ 74556422 (+)
G83436 NA non-coding downstream 28144 74576769 ~ 74577227 (+)
G83471 NA non-coding downstream 51311 74599936 ~ 74600166 (+)
G83548 NA non-coding downstream 96295 74644920 ~ 74645219 (+)
G82111 LOC106577091 other upstream 976629 73551616 ~ 73571737 (+)
ccdc85a ccdc85a other upstream 3472264 71036440 ~ 71076239 (+)
G78121 NA other upstream 3893405 70571665 ~ 70654961 (+)
G75747 NA other upstream 6173437 68374505 ~ 68374929 (+)
G74139 NA other upstream 7763397 66784335 ~ 66784969 (+)
G83836 NA other downstream 360600 74909225 ~ 74909806 (+)
G83829 NA other downstream 564035 75112660 ~ 75114190 (+)
G83979 NA other downstream 596239 75144864 ~ 75145512 (+)
LOC110529610 NA other downstream 1909499 76457821 ~ 76459823 (+)
G86019 NA other downstream 2083120 76631745 ~ 76635936 (+)

Expression


Co-expression Network