G83548


Basic Information

Item Value
gene id G83548
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 74644920 ~ 74645219 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU92181
atatggctgcctaaatatggttcccaatcagagacaacaaaaaacacctgcctctgattgagaaccactccaggcaaccatagacttacctagaatacttaactaaacacaatcccatagactacaaaacccctagacaaaacaagacacataaatcacccttgtcacaccctggcctaaccaacataataaagaaaacacagaatactaagaccagggcgtgacaatatcaCTCGTCTTCATACTTCCGCTCATGTCATCCAATTacactgaataaaatagaaacgcaacatgtaaagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92181 True 300 lncRNA 0.40 1 74644920 74645219

Neighbor

gene id symbol gene type direction distance location
ebf3a LOC106577027 coding upstream 302325 74268680 ~ 74342595 (+)
bnip3 bnip3 coding upstream 418155 74218970 ~ 74226765 (+)
LOC110529196 LOC106577022 coding upstream 452500 74190060 ~ 74192420 (+)
LOC110529185 mxi1 coding upstream 461221 74171733 ~ 74183699 (+)
LOC110529161 add3 coding upstream 484649 74111112 ~ 74160271 (+)
LOC118966714 NA coding downstream 11337 74656556 ~ 74656864 (+)
insyn2a fam196a coding downstream 36815 74682034 ~ 74709286 (+)
c1h10orf90 cssa18h10orf90 coding downstream 147337 74792556 ~ 74812476 (+)
LOC110529328 adam12 coding downstream 172488 74817707 ~ 74965855 (+)
LOC110529343 LOC106577035 coding downstream 330016 74975235 ~ 74981532 (+)
G83471 NA non-coding upstream 44754 74599936 ~ 74600166 (+)
G83436 NA non-coding upstream 67693 74576769 ~ 74577227 (+)
G83405 NA non-coding upstream 88498 74556065 ~ 74556422 (+)
G83393 NA non-coding upstream 94996 74549711 ~ 74549924 (+)
G83388 NA non-coding upstream 96295 74548366 ~ 74548625 (+)
G83588 NA non-coding downstream 27183 74672402 ~ 74672935 (+)
G83668 NA non-coding downstream 84583 74729802 ~ 74730073 (+)
G83673 NA non-coding downstream 89435 74734654 ~ 74734948 (+)
G83683 NA non-coding downstream 95710 74740929 ~ 74741163 (+)
G83713 NA non-coding downstream 113708 74758927 ~ 74759219 (+)
G82111 LOC106577091 other upstream 1073183 73551616 ~ 73571737 (+)
ccdc85a ccdc85a other upstream 3568818 71036440 ~ 71076239 (+)
G78121 NA other upstream 3989959 70571665 ~ 70654961 (+)
G75747 NA other upstream 6269991 68374505 ~ 68374929 (+)
G74139 NA other upstream 7859951 66784335 ~ 66784969 (+)
G83836 NA other downstream 264006 74909225 ~ 74909806 (+)
G83829 NA other downstream 467441 75112660 ~ 75114190 (+)
G83979 NA other downstream 499645 75144864 ~ 75145512 (+)
LOC110529610 NA other downstream 1812905 76457821 ~ 76459823 (+)
G86019 NA other downstream 1986526 76631745 ~ 76635936 (+)

Expression


Co-expression Network