XLOC_020306 (BX323550.1)


Basic Information

Item Value
gene id XLOC_020306
gene name BX323550.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 15732967 ~ 15734843 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040312
AGTTTTCAGAGAGCCGCCATCAGCATCATCCACGTGGACTGGCTCTCATTGGATCGAAACCTTCTGATAAAAATGCCTTAAAAAGCCCAtattatagAATCTTATCAAAACACCAACTTGGAGTGGGTCAAATCAGAAAGAGTGCCAGAGGACACCGTTTCAGTTGTGGATGAAGGAAAGCAACATTACATTGCTAAACATATCTCAAAATGTGAGCTTTGCTTTTTCGATAGCAATTTACAGTCCTGTTTTAAAAGGGTGGCCACCGGGGAATGGAAATATGTGAAAATTTCCAATTACAAAGacttgatgtttttattaaacaggGACAACTTTGAACTGCTGGAATGGAAGAAATATACCAACGAAAGATTTCCACCAATGTCACTGGTGGTATGTGGgcaatttattgttaaaaatctGAACATGAGAGCACAAACCGATGGGGAAGTGCTCGCCATAAACACTGACATTAAAGTGCAACAAATATCAAGTGCGGTGATAACATAAAACCTTGAAGTGCTCAAACATTTCAAAGCT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000092781

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040312 True 540 processed_transcript 0.39 2 15732967 15734843

Neighbor

gene id symbol gene type direction distance location
XLOC_020305 fam32a coding upstream 11144 15720381 ~ 15721823 (+)
XLOC_020304 CABZ01090041.1 coding upstream 89908 15633013 ~ 15643059 (+)
XLOC_020303 lpl coding upstream 102546 15624371 ~ 15630421 (+)
XLOC_020302 gpc1a coding upstream 184766 15507218 ~ 15548201 (+)
XLOC_020301 gpc5b coding upstream 231550 15438513 ~ 15501417 (+)
XLOC_020307 si:dkeyp-70f9.7 coding downstream 12494 15747337 ~ 15748440 (+)
XLOC_020308 BX323550.5 coding downstream 53138 15787981 ~ 15937268 (+)
XLOC_020309 klf2a coding downstream 163378 15898221 ~ 15900919 (+)
XLOC_020310 stil coding downstream 225001 15959844 ~ 16016271 (+)
XLOC_020311 serpinc1 coding downstream 287368 16022211 ~ 16028191 (+)
XLOC_020300 NA non-coding upstream 372783 15358159 ~ 15360184 (+)
XLOC_020293 NA non-coding upstream 631541 15099470 ~ 15101426 (+)
XLOC_020292 NA non-coding upstream 667015 15058189 ~ 15065952 (+)
XLOC_020291 NA non-coding upstream 722279 14991684 ~ 15010688 (+)
XLOC_020290 NA non-coding upstream 851541 14879864 ~ 14881426 (+)
XLOC_020313 CR751228.1 non-coding downstream 542655 16277498 ~ 16277625 (+)
XLOC_020322 BX322568.1 non-coding downstream 904467 16639310 ~ 16639425 (+)
XLOC_020324 NA non-coding downstream 1075441 16810284 ~ 16811361 (+)
XLOC_020339 BX908731.2 non-coding downstream 2089616 17824459 ~ 17824573 (+)

Expression


Co-expression Network