G83847


Basic Information

Item Value
gene id G83847
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 74912356 ~ 74912675 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU92498
tagcaacacctccacctttgcgggatgcacgggggatatggtcactagtttaaccaggaggtgaggcctcatttaacacagtaaattcatcaggcttaagccatgtttcagtcaggccaatcacatcaagattatgaccagtgattagttcattgactataactgcctttgaagtgagggatgtAACATTAagagccctattttgagatgtgaggtatcacgatctctttcaacaatgcaggaatggaggaggtctttattctagtgagattgctaaggcgaacactgccatgtttagttttgcccaacctaggtcgagg

Function

NR:

description
ORF2 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92498 True 320 lncRNA 0.47 1 74912356 74912675

Neighbor

gene id symbol gene type direction distance location
c1h10orf90 cssa18h10orf90 coding upstream 99880 74792556 ~ 74812476 (+)
insyn2a fam196a coding upstream 203070 74682034 ~ 74709286 (+)
LOC118966714 NA coding upstream 255492 74656556 ~ 74656864 (+)
ebf3a LOC106577027 coding upstream 569761 74268680 ~ 74342595 (+)
bnip3 bnip3 coding upstream 685591 74218970 ~ 74226765 (+)
LOC110529343 LOC106577035 coding downstream 62560 74975235 ~ 74981532 (+)
LOC110529380 LOC106577038 coding downstream 84108 74996783 ~ 75112403 (+)
LOC110529425 LOC106577041 coding downstream 242493 75155168 ~ 75182737 (+)
LOC110532673 LOC106577093 coding downstream 318063 75230738 ~ 75233988 (+)
LOC110529439 LOC106577042 coding downstream 363310 75275985 ~ 75311494 (+)
G83846 NA non-coding upstream 369 74911780 ~ 74911987 (+)
LOC110529328 adam12 non-coding upstream 8870 74817707 ~ 74965855 (+)
G83760 NA non-coding upstream 113678 74798394 ~ 74798678 (+)
G83713 NA non-coding upstream 153137 74758927 ~ 74759219 (+)
G83683 NA non-coding upstream 171193 74740929 ~ 74741163 (+)
G83848 NA non-coding downstream 806 74913481 ~ 74913695 (+)
G83858 NA non-coding downstream 19436 74932111 ~ 74932578 (+)
G83755 NA non-coding downstream 55753 74968428 ~ 74970629 (+)
G83830 NA non-coding downstream 222407 75135082 ~ 75137791 (+)
G83976 NA non-coding downstream 227854 75140529 ~ 75140814 (+)
G83836 NA other upstream 2550 74909225 ~ 74909806 (+)
G82111 LOC106577091 other upstream 1340619 73551616 ~ 73571737 (+)
ccdc85a ccdc85a other upstream 3836254 71036440 ~ 71076239 (+)
G78121 NA other upstream 4257395 70571665 ~ 70654961 (+)
G75747 NA other upstream 6537427 68374505 ~ 68374929 (+)
G83829 NA other downstream 199985 75112660 ~ 75114190 (+)
G83979 NA other downstream 232189 75144864 ~ 75145512 (+)
LOC110529610 NA other downstream 1545449 76457821 ~ 76459823 (+)
G86019 NA other downstream 1719070 76631745 ~ 76635936 (+)
G86614 NA other downstream 2211260 77123935 ~ 77124427 (+)

Expression


Co-expression Network