Gene
RNA
| Item | Value |
|---|---|
| gene id | G84092 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 74920369 ~ 74920623 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| nucleotide-binding oligomerization domain-containing protein 2 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU92772 | True | 255 | lncRNA | 0.31 | 1 | 74920369 | 74920623 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529307 | LOC106577031 | coding | downstream | 191523 | 74709330 ~ 74728846 (-) |
| LOC110529277 | ptpre | coding | downstream | 388744 | 74479938 ~ 74531625 (-) |
| gnrh3 | NA | coding | downstream | 442091 | 74477119 ~ 74478278 (-) |
| mgmt | mgmt | coding | downstream | 542215 | 74348790 ~ 74378154 (-) |
| LOC110529206 | ppp2r2d | coding | downstream | 686252 | 74229248 ~ 74234117 (-) |
| fank1 | fank1 | coding | upstream | 51149 | 74971772 ~ 74975108 (-) |
| edrf1 | LOC106577037 | coding | upstream | 61633 | 74982256 ~ 74996768 (-) |
| LOC110529369 | LOC100380861 | coding | upstream | 192018 | 75112641 ~ 75133272 (-) |
| LOC110529412 | LOC106577039 | coding | upstream | 214456 | 75135010 ~ 75148790 (-) |
| LOC110522123 | LOC106577094 | coding | upstream | 424490 | 75345113 ~ 75348344 (-) |
| G84087 | NA | non-coding | downstream | 6663 | 74913462 ~ 74913706 (-) |
| G84085 | NA | non-coding | downstream | 10418 | 74909555 ~ 74909951 (-) |
| G84023 | NA | non-coding | downstream | 103479 | 74816395 ~ 74816890 (-) |
| G84020 | NA | non-coding | downstream | 108258 | 74811172 ~ 74812111 (-) |
| G84015 | cssa18h10orf90 | non-coding | downstream | 120464 | 74798703 ~ 74799905 (-) |
| G84094 | NA | non-coding | upstream | 5326 | 74925949 ~ 74926188 (-) |
| G84095 | NA | non-coding | upstream | 5791 | 74926414 ~ 74926649 (-) |
| G84102 | NA | non-coding | upstream | 15577 | 74936200 ~ 74936400 (-) |
| G84231 | LOC106577038 | non-coding | upstream | 185751 | 75106374 ~ 75107397 (-) |
| G83429 | NA | other | downstream | 347580 | 74572447 ~ 74572789 (-) |
| LOC110528794 | LOC106576993 | other | downstream | 2668451 | 72202814 ~ 72251918 (-) |
| G80957 | NA | other | downstream | 2709280 | 72207929 ~ 72211089 (-) |
| G79904 | NA | other | downstream | 3176560 | 71743045 ~ 71743809 (-) |
| G79700 | NA | other | downstream | 3449910 | 71469435 ~ 71470755 (-) |
| G84713 | NA | other | upstream | 607720 | 75528343 ~ 75528903 (-) |
| G85866 | NA | other | upstream | 1412845 | 76333468 ~ 76334136 (-) |
| ccser2a | ccser2 | other | upstream | 1446670 | 76324531 ~ 76399997 (-) |
| G86063 | NA | other | upstream | 1600462 | 76516251 ~ 76523481 (-) |
