G83830


Basic Information

Item Value
gene id G83830
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 75135082 ~ 75137791 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU92480
GCATGTCTCTTTTATTATTACAACCCACTTAAGAACCAAGTGACCAAAATAACTTGGCCTTTTCCTGTCCCACCGACCTTACAGACATGAGTGATGTGATGGGACTTTGTACTTCAGGGAGAAGTTACAGGCTCTCAGGGGCCATTTCCAGCTAGGGGCCAAACCATGTTATTAAAGAGTACTTTCACCCTTCTCTCCTGCCAGCCACTTCCATCGTGACTGAGATTCTCATAaataagtgctgtttgaatgctACAACctcctatatactgtacagtgtacaTTCATTATTGATTACTTTTTCTTAACTCCCATTGTTGATTCAAGTGCTCAAGTGGAAACCACTCCTTTCTCGAATTTTATCATTATAATCTTTTGTGGGACTTCGTAGTTCAGTAATTAATATCTTCTAAAACAAATGAGAGTACCAGTCCACCAAGCTATGAGTTGACATTATACAGTAATGCTGAGTGATGAAGGAAAGCAAGTTGACCATAAGGCAGAAAGAGTGACATACAATGTGGGCTGCACATGGGAAAAGCTATATACACAAGGCTTGGATAACACTGCAGGGTGAAGGATACTCTGCCCACAATTGGAACAACCTTTCTTCTTTCCAGTCGCTTGCAATGTGCGTGTAGTAACAAGCCAGTGTAACTGCCAAAATGGAAGGCACTGGACTCTGAACTGAGGTCATTTTTGTCACATTATCAAGGTCCATACACATTTAGCCCAATCAGCTTTGAGTGTGAGGTCTATTGGTGTTGACAAGACAGTCAGGAGATGTCTTGTTCCAAGGCTGTAACATATAGCTACAGGGGGAAACCGTTCCCACAGAATTACCTTGGGGGAAGCCATTCTAGTCAGTTTCAGCACTCAGCAGAAATGGAGATGACCAGCAGTGCAAGGACATGAGATGAAAGAAGCAGACAGGTTATTAATGTCGATGCACAGTTCTTGTTTAGTGGTAGCTCTGATGCAGCAGCAAGGTCTGGTTAGTAAAGCTAGAGTACGTTGTGTTTTCTCCCTGTCAACCCCATACAATCCACAAAAGCTGAGCTAGCTCAGCTCAGGTGATCAAAGCGTACTTCTCAAGTGGCACAACTGAACAGCATTGGTAAAGCACAATAACGAAATCCTCTAAATGTGTTATGTGCAGCAAAGCGCATACAGTTGTTTGTGTTATTTAAGAAAAATTAGACATTGAGTGACATTAATTAGGGATACTGCGAGAATCTGTTTTTTATAGTCACCcatagtcagatgaactcgtagaTACCATTTTTCGTATGCAAGTGTACCTGTAGACTTCTCGTCTTTGCACTAACtttagttagcattggctcgtgaaactaacttccttcatactgcatGCAGAGGTGCCATCCACGAATTCTTCTGACTGGGTCATAGCTGTTATTTTGTCCTAAAAATTAATATAAGCACAAATTACAGTAGTGGCGAAGTAAAACTGAATCTAGACTCTTTGTCATCTAAATAGGCAACCGCATGATTCATAAAATCCATTGATTGTTAAAGGAAATTAAATCCTAATAAAGACAGCTCAAAGTAGAGTATCAGAACTGTGCAGACTAATGAAATTATAGCTTACGCATACATTTATTACTCCTTTGTAataagcaaaaaaaaagaaaagacaaAAAAAGAACAACACCTGTCTCACTAAAAAGACAAGTTTGAAGGCCACAGAACATTTTCCCTTTGCTTGTCTTAAATAAATTGTTAAAAGGCAAACATAGTGCAAGAGGTAATGGTACAATTGGATGCTCAAAGTTGATGATGCAGATGTGACGCAGCATGATCCAGGACGAGCGGAGTGGGTCTATCCATTCTGAGAGGTCGGACAAACTGGTTGGCGTTTATTCAGTTATAACGTAATCAGTCCCTAAATCAAACACATTCACTGGAGGCAGCCAGGCTCCAACTGACTATCTTTACCACACTAGACAGAAAAGTATAGCCCATGAAGCATGACATTACCCCCCAGAATGGTTATCAAACTAAAAGCGAACAGAAATACACATGCCTTTTATTTTCCGGGCTGGCACTTCCTCTGTAATATAGAAGACTACTCTCTTTGATTGGTTGGGATGCCATCCTCTCCCAGTGTGTCAGTTAATTGTGTCCCCATGGCTGGCGTCTACGAAGTCTGTGAGCCAAGGACTGAGGCATCACCGTCTGGACTGAGGGCGGCTGGGCGGCCCTGCGCCAACACACTGGCAGTAACCGGGGGCAACTGTGCCACCTCGCTCACAAGGTTCTCATACTCACTGctgtcctcatcatcatcatcctcctcctcctcctcctcctcctcctcctcctcctcctcttgcccTGCAGCCTGTCTGTCCAGGGAGTCAGAGCTGGATCCGTCTCCGTTCCCCAGGTAGGGCGTACTGGGGCTAGGAGCAGGGctggggttcagacccagaggACTGGGAGAAGGGTGGCCTGGAGAGCCCACAGCCTGGGGACGGGGAAGCAGCGCAGCACTGGTAGGGGAGGACAAGGAGGGGAGGAGCGAGTCATCCTGCAAGGAGTGGAGGTCTGCGTAGGAAGGGGGGTTTGCAGAGGGACCTAGCCGCTCGGGGGTAGATGGGGTGTGAAAGGCCACCCTGGACAGGAGGGAGGTCTCCGGGGGCTCAGAGTTCTCCTCAGGAGTAGGACGTTGCTCAGGGTTCTGCGC
>TU92481
GCATGTCTCTTTTATTATTACAACCCACTTAAGAACCAAGTGACCAAAATAACTTGGCCTTTTCCTGTCCCACCGACCTTACAGACATGAGTGATGTGATGGGACTTTGTACTTCAGGGAGAAGTTACAGGCTCTCAGGGGCCATTTCCAGCTAGGGGCCAAACCATGTTATTAAAGAGTACTTTCACCCTTCTCTCCTGCCAGCCACTTCCATCGTGACTGAGATTCTCATAaataagtgctgtttgaatgctACAACctcctatatactgtacagtgtacaTTCATTATTGATTACTTTTTCTTAACTCCCATTGTTGATTCAAGTGCTCAAGTGGAAACCACTCCTTTCTCGAATTTTATCATTATAATCTTTTGTGGGACTTCGTAGTTCAGTAATTAATATCTTCTAAAACAAATGAGAGTACCAGTCCACCAAGCTATGAGTTGACATTATACAGTAATGCTGAGTGATGAAGGAAAGCAAGTTGACCATAAGGCAGAAAGAGTGACATACAATGTGGGCTGCACATGGGAAAAGCTATATACACAAGGCTTGGATAACACTGCAGGGTGAAGGATACTCTGCCCACAATTGGAACAACCTTTCTTCTTTCCAGTCGCTTGCAATGTGCGTGTAGTAACAAGCCAGTGTAACTGCCAAAATGGAAGGCACTGGACTCTGAACTGAGGTCATTTTTGTCACATTATCAAGGTCCATACACATTTAGCCCAATCAGCTTTGAGTGTGAGGTCTATTGGTGTTGACAAGACAGTCAGGAGATGTCTTGTTCCAAGGCTGTAACATATAGCTACAGGGGGAAACCGTTCCCACAGAATTACCTTGGGGGAAGCCATTCTAGTCAGTTTCAGCACTCAGCAGAAATGGAGATGACCAGCAGTGCAAGGACATGAGATGAAAGAAGCAGACAGGTTATTAATGTCGATGCACAGTTCTTGTTTAGTGGTAGCTCTGATGCAGCAGCAAGGTCTGGTTAGTAAAGCTAGAGTACGTTGTGTTTTCTCCCTGTCAACCCCATACAATCCACAAAAGCTGAGCTAGCTCAGCTCAGGTGATCAAAGCGTACTTCTCAAGTGGCACAACTGAACAGCATTGGTAAAGCACAATAACGAAATCCTCTAAATGTGTTATGTGCAGCAAAGCGCATACAGTTGTTTGTGTTATTTAAGAAAAATTAGACATTGAGTGACATTAATTAGGGATACTGCGAGAATCTGTTTTTTATAGTCACCcatagtcagatgaactcgtagaTACCATTTTTCGTATGCAAGTGTACCTGTAGACTTCTCGTCTTTGCACTAACtttagttagcattggctcgtgaaactaacttccttcatactgcatGCAGAGGTGCCATCCACGAATTCTTCTGACTGGGTCATAGCTGTTATTTTGTCCTAAAAATTAATATAAGCACAAATTACAGTAGTGGCGAAGTAAAACTGAATCTAGACTCTTTGTCATCTAAATAGGCAACCGCATGATTCATAAAATCCATTGATTGTTAAAGGAAATTAAATCCTAATAAAGACAGCTCAAAGTAGAGTATCAGAACTGTGCAGACTAATGAAATTATAGCTTACGCATACATTTATTACTCCTTTGTAataagcaaaaaaaaagaaaagacaaAAAAAGAACAACACCTGTCTCACTAAAAAGACAAGTTTGAAGGCCACAGAACATTTTCCCTTTGCTTGTCTTAAATAAATTGTTAAAAGGCAAACATAGTGCAAGAGGTAATGGTACAATTGGATGCTCAAAGTTGATGATGCAGATGTGACGCAGCATGATCCAGGACGAGCGGAGTGGGTCTATCCATTCTGAGAGGTCGGACAAACTGGTTGGCGTTTATTCAGTTATAACGTAATCAGTCCCTAAATCAAACACATTCACTGGAGGCAGCCAGGCTCCAACTGACTATCTTTACCACACTAGACAGAAAAGTATAGCCCATGAAGCATGACATTACCCCCCAGAATGGTTATCAAACTAAAAGCGAACAGAAATACACATGCCTTTTATTTTCCGGGCTGGCACTTCCTCTGTAATATAGAAGACTACTCTCTTTGATTGGTTGGGATGCCATCCTCTCCCAGTGTGTCAGTTAATTGTGTCCCCATGGCTGGCGTCTACGAAGTCTGTGAGCCAAGGACTGAGGCATCACCGTCTGGACTGAGGGCGGCTGGGCGGCCCTGCGCCAACACACTGGCAGTAACCGGGGGCAACTGTGCCACCTCGCTCACAAGGTTCTCATACTCACTGctgtcct

Function

NR:

description
BRISC complex subunit Abro1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92480 False 2710 lncRNA 0.45 1 75135082 75137791
TU92481 True 2301 lncRNA 0.42 1 75135082 75137382

Neighbor

gene id symbol gene type direction distance location
LOC110529380 LOC106577038 coding upstream 22679 74996783 ~ 75112403 (+)
LOC110529343 LOC106577035 coding upstream 153550 74975235 ~ 74981532 (+)
LOC110529328 adam12 coding upstream 169227 74817707 ~ 74965855 (+)
c1h10orf90 cssa18h10orf90 coding upstream 322606 74792556 ~ 74812476 (+)
insyn2a fam196a coding upstream 425796 74682034 ~ 74709286 (+)
LOC110529425 LOC106577041 coding downstream 17377 75155168 ~ 75182737 (+)
LOC110532673 LOC106577093 coding downstream 92947 75230738 ~ 75233988 (+)
LOC110529439 LOC106577042 coding downstream 138194 75275985 ~ 75311494 (+)
LOC110529485 LOC106577045 coding downstream 397211 75535002 ~ 75539343 (+)
LOC110529500 LOC106577048 coding downstream 477426 75615217 ~ 75648612 (+)
G83755 NA non-coding upstream 164453 74968428 ~ 74970629 (+)
G83858 NA non-coding upstream 202504 74932111 ~ 74932578 (+)
G83848 NA non-coding upstream 221387 74913481 ~ 74913695 (+)
G83847 NA non-coding upstream 222407 74912356 ~ 74912675 (+)
G83846 NA non-coding upstream 223095 74911780 ~ 74911987 (+)
G83976 NA non-coding downstream 2738 75140529 ~ 75140814 (+)
G83977 NA non-coding downstream 3085 75140876 ~ 75142233 (+)
G83978 NA non-coding downstream 6125 75143916 ~ 75144255 (+)
G83980 NA non-coding downstream 7858 75145649 ~ 75145883 (+)
G83981 NA non-coding downstream 8416 75146207 ~ 75146660 (+)
G83829 NA other upstream 20892 75112660 ~ 75114190 (+)
G83836 NA other upstream 225276 74909225 ~ 74909806 (+)
G82111 LOC106577091 other upstream 1563345 73551616 ~ 73571737 (+)
ccdc85a ccdc85a other upstream 4058980 71036440 ~ 71076239 (+)
G78121 NA other upstream 4480121 70571665 ~ 70654961 (+)
G83979 NA other downstream 7073 75144864 ~ 75145512 (+)
LOC110529610 NA other downstream 1320333 76457821 ~ 76459823 (+)
G86019 NA other downstream 1493954 76631745 ~ 76635936 (+)
G86614 NA other downstream 1986144 77123935 ~ 77124427 (+)
G87159 NA other downstream 2432224 77570015 ~ 77570470 (+)

Expression

G83830 Expression in all Baseline Samples

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G83830 Expression in each Bioproject

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G83830 Expression in each Sample
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Co-expression Network