G85413



Basic Information


Item Value
gene id G85413
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 76280350 ~ 76280584 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU94185
GGATTATCTAGAAAAAGCAGCAGAGTTGCGCATGAGGTTTCTAAGAAGAGGCTATCCCTCACAATGTGTGGATGAAGCTCATAATTTGGCATTGGAAAAAACACGAGATGAACTGCTACAAAAAGGACCCgctaaagctaaagaacactctgtaatgttcacaaccACATATACTTTGAATTCGCGAAAAGTGGGAGGTGTGGTCAAGAAACACTGGCATATTTTATCATCGGAC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU94185 True 235 lncRNA 0.41 1 76280350 76280584

Neighbor


gene id symbol gene type direction distance location
LOC110532683 LOC106577051 coding upstream 102372 75833931 ~ 76177978 (+)
LOC110529516 LOC106577050 coding upstream 556197 75695432 ~ 75724153 (+)
LOC110529506 LOC106577049 coding upstream 587339 75656587 ~ 75693011 (+)
LOC110529500 LOC106577048 coding upstream 631738 75615217 ~ 75648612 (+)
LOC110529485 LOC106577045 coding upstream 741007 75535002 ~ 75539343 (+)
LOC110522192 LOC106577055 coding downstream 123597 76404181 ~ 76416951 (+)
LOC110529556 LOC106577056 coding downstream 139843 76420427 ~ 76433438 (+)
LOC110529567 LOC106577057 coding downstream 153677 76434261 ~ 76440072 (+)
LOC110529603 NA coding downstream 171681 76452265 ~ 76457775 (+)
LOC110529610 NA coding downstream 177237 76457821 ~ 76459823 (+)
G85391 NA non-coding upstream 26718 76253395 ~ 76253632 (+)
G85386 NA non-coding upstream 32953 76247192 ~ 76247397 (+)
G85383 NA non-coding upstream 36604 76243538 ~ 76243746 (+)
G85374 NA non-coding upstream 50472 76229595 ~ 76229878 (+)
G85373 NA non-coding upstream 50995 76229132 ~ 76229355 (+)
G85431 NA non-coding downstream 19542 76300126 ~ 76300492 (+)
G85432 NA non-coding downstream 20214 76300798 ~ 76301289 (+)
G85449 NA non-coding downstream 49644 76330228 ~ 76332586 (+)
G85450 NA non-coding downstream 52340 76332924 ~ 76333208 (+)
G85451 NA non-coding downstream 54080 76334664 ~ 76334952 (+)
G83979 NA other upstream 1134838 75144864 ~ 75145512 (+)
G83829 NA other upstream 1166160 75112660 ~ 75114190 (+)
G83836 NA other upstream 1370544 74909225 ~ 74909806 (+)
G82111 LOC106577091 other upstream 2708613 73551616 ~ 73571737 (+)
ccdc85a ccdc85a other upstream 5204248 71036440 ~ 71076239 (+)
G86019 NA other downstream 351161 76631745 ~ 76635936 (+)
G86614 NA other downstream 843351 77123935 ~ 77124427 (+)
G87159 NA other downstream 1289431 77570015 ~ 77570470 (+)
G89667 NA other downstream 3268433 79549017 ~ 79549651 (+)

Expression



Co-expression Network