G85950



Basic Information


Item Value
gene id G85950
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 76462027 ~ 76462551 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU94750
cgggatttcttatacgcGTTGggattagagtcccgctccttgaaagcaccAGCTCCATCCTTTCGCTCGGTGAGGATGTAATTTCTCGcattatacattttacagacacaaaaagatcccaacaTATCAAACGAACAAATGATCTGTCGGCTTCCTGTTTCTGTCACAACTGTCATGATTTTTATTCCATTTGGTATGACTTTACTctcataaaaactgtggatggaaacatggtcaGTGAGAAGATTAATGGAAATAAGCAATACACTCCATGTCGGTGGTCACCAACTGGTCAGATCACCATGTCTGcacaaagagctgctgttttaaTGAAATGCGTGTTTTCCTTACTTCCACTcacactacaaccagcactgcagctgcaaaGAATGAGTATAGCAAAGTGTTCCGATAAGCttgcgttgttattattagcagctTGTCTTTCTTTAAATctaggaatatttcactttcccTGATCATAagagtaacaacatgaatgtgtgcatgaggcagaaataatgc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU94750 True 525 lncRNA 0.40 1 76462027 76462551

Neighbor


gene id symbol gene type direction distance location
LOC110529591 fam149b1 coding downstream 9859 76444408 ~ 76452168 (-)
ccser2a ccser2 coding downstream 62030 76324531 ~ 76399997 (-)
vkorc1 LOC106577046 coding downstream 849631 75609347 ~ 75612396 (-)
LOC110529486 LOC106577095 coding downstream 887081 75556145 ~ 75574946 (-)
LOC110529484 LOC106577044 coding downstream 958746 75500710 ~ 75503281 (-)
LOC118964475 LOC106577059 coding upstream 3412 76465963 ~ 76467210 (-)
LOC110529704 LOC106577064 coding upstream 400928 76863479 ~ 76871869 (-)
LOC110529688 LOC106577065 coding upstream 409541 76872092 ~ 76930446 (-)
LOC110529759 LOC106577068 coding upstream 585251 77045476 ~ 77084980 (-)
LOC110529788 LOC106577150 coding upstream 622323 77084874 ~ 77103340 (-)
G85852 NA non-coding downstream 161548 76300236 ~ 76300479 (-)
G85851 NA non-coding downstream 162304 76299376 ~ 76299723 (-)
G85834 NA non-coding downstream 186406 76275375 ~ 76275621 (-)
G85951 NA non-coding upstream 31 76462582 ~ 76462892 (-)
G85960 NA non-coding upstream 12298 76474849 ~ 76475437 (-)
G86063 NA non-coding upstream 53700 76516251 ~ 76523481 (-)
G86094 LOC106577062 non-coding upstream 99652 76562203 ~ 76575643 (-)
G86133 NA non-coding upstream 146133 76608684 ~ 76609644 (-)
G85866 NA other downstream 127891 76333468 ~ 76334136 (-)
G84713 NA other downstream 933124 75528343 ~ 75528903 (-)
fank1 fank1 other downstream 1488706 74971772 ~ 74975108 (-)
G83429 NA other downstream 1889238 74572447 ~ 74572789 (-)
G86132 LOC106577062 other upstream 144131 76606682 ~ 76608354 (-)
G86448 NA other upstream 404353 76866904 ~ 76867598 (-)
G87090 NA other upstream 1016052 77478603 ~ 77479939 (-)
G89418 NA other upstream 2587260 79049811 ~ 79050491 (-)

Expression



Co-expression Network